Factsheet for Os05t0154700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037599_P001	Maize	extracellular	86.57	88.18
EES17741	Sorghum	cytosol	87.06	88.13
TraesCS1A01G095000.4	Wheat	cytosol	86.57	87.97
TraesCS1B01G123200.1	Wheat	cytosol	86.57	87.86
TraesCS1D01G104200.1	Wheat	cytosol	86.32	87.61
Zm00001d009840_P001	Maize	cytosol, mitochondrion	85.35	84.12
AT4G15885.1	Thale cress	nucleus	10.13	73.45
GSMUA_Achr2P01660_001	Banana	cytosol	69.35	71.72
CDY51069	Canola	cytosol	34.8	71.07
PGSC0003DMT400011996	Potato	cytosol	66.54	67.96
Solyc12g099540.1.1	Tomato	cytosol	66.54	67.96
VIT_05s0020g01200.t01	Wine grape	cytosol	67.16	67.48
PGSC0003DMT400021738	Potato	cytosol	54.09	67.22
CDY51066	Canola	cytosol	16.0	66.84
KRH50824	Soybean	cytosol	66.3	66.71
Solyc05g054260.2.1	Tomato	nucleus	65.69	66.58
CDY70227	Canola	cytosol	23.08	66.55
Solyc01g066820.2.1	Tomato	cytosol	63.74	66.5
KRH02264	Soybean	cytosol	65.93	66.26
Bra021186.1-P	Field mustard	cytosol	62.88	65.36
AT3G16630.1	Thale cress	cytosol	63.13	65.11
GSMUA_Achr11P...	Banana	cytosol	65.08	65.0
CDY34962	Canola	cytosol	61.05	64.77
CDX92088	Canola	cytosol	47.99	63.49
Bra012755.1-P	Field mustard	cytosol	62.76	62.45
KRH37102	Soybean	cytosol	65.32	61.21
KRH12061	Soybean	cytosol	64.96	61.01
Bra022171.1-P	Field mustard	cytosol	62.15	60.17
HORVU1Hr1G022250.2	Barley	plastid	65.08	59.62
CDY28354	Canola	cytosol	61.05	55.87
CDX90558	Canola	nucleus	13.31	55.61
CDY43118	Canola	endoplasmic reticulum	61.54	54.02
VIT_06s0009g02690.t01	Wine grape	nucleus	10.62	47.8
CDY70641	Canola	cytosol, nucleus, plastid	12.09	47.37
VIT_00s0160g00140.t01	Wine grape	extracellular	8.3	46.26
Os01t0625200-01	Rice	cytosol	17.34	45.95
CDY34961	Canola	cytosol	9.89	45.0
VIT_10s0042g00380.t01	Wine grape	cytosol	9.04	35.92
CDX75887	Canola	cytosol	4.88	34.78
Os01t0605500-00	Rice	plastid	20.76	21.91
Os03t0773600-01	Rice	cytosol	19.05	21.22
Os05t0459400-01	Rice	cytosol, plastid	15.02	21.06
Os04t0375900-01	Rice	cytosol	10.62	11.98
Os05t0154800-01	Rice	nucleus	0.49	1.58

Protein Annotations

MapMan:13.3.3.3	MapMan:20.1.3.11	Gene3D:3.40.850.10	EntrezGene:4337845	ProteinID:AAV31326.1	ProteinID:AAV32215.1
EMBL:AB531488	EMBL:AK064328	UniProt:B9FMJ3	ProteinID:BAF16598.1	ProteinID:BAS92345.1	ncoils:Coil
ProteinID:EEE62380.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005856	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:1903338	InterPro:IPR001752
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	EnsemblPlantsGene:Os05g0154700
EnsemblPlants:Os05t0154700-01	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF720	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0001933DC3	RefSeq:XP_015639990.1
SEG:seg	:	:	:	:	:

Description

SMALL AND ROUND SEED 3Kinesin 13 protein, Regulation of grain length and plant height (Os05t0154700-01)

Coordinates

chr5:+:3203306..3209681

Molecular Weight (calculated)

90466.9 Da

IEP (calculated)

5.492

GRAVY (calculated)

-0.704

Length

819 amino acids

Sequence
(BLAST)

001: MGDSGDAVMA RWLQSAGLQH LAASSTSSSS ASTAGGGVDP RGGGGVGVGA LGGGAGGGSL LPSLLMQGYG PQSIEEKQRL YMLLRSLNFN GETAPPSISE
101: PYTPTAQSFG GGNSLEGFYS PELRGELGAG LLDLHAMDDT ELLSEDVASE PFEPSPFIPK EMDEDDDDML PGSQPGPSDN YNAVANEKES TARENNVAKI
201: KVVVRKRPLN RKEVSRKEED IITVHDSSSL TVYEPKLKVD LTAYVEKHEF CFDAVLDEQV SNDEVYRETV EPIIPIIFQR TKATCFAYGQ TGSGKTYTMQ
301: PLPLRAAQDM VRLLHQPVYR NQNFKLWLSY FEIYGGKLFD LLSDRRQLLM REDGKKQVCI VGLQEFEVSD VQIVKEYIER GNAARSTGST GANEESSRSH
401: AILQLAIKKH IIVTDTRRQR DRDANESKNT KAVGKISFID LAGSERGADT TDNDRQTRIE GAEINKSLLA LKECIRALDN DQIHIPFRGS KLTEVLRDSF
501: VGNSRTVMIS CISPNAGSCE HTLNTLRYAD RVKSLSKGSN TRKEQPTGPT IPSSKDSSSA PSYPMPIETE EIANQIQEKR PVETSRKAAE NFTSNSSMEP
601: DRNPVSMIPS YSNRGKEENG SSGLNDRERV DLNSSRISYN SKPQSVQSSA NLQEEEKVTK VSPPRRKAYR DDKPERQSNY AKKDSGPETS RPGYKVQQAK
701: QLQQQQRPTS ASASQNSSRQ SEKESSCDDV EIDAILEEEE ALIAAHRKEI ENTMEIVREE MNLLAEVDQP GSLIDNYVTQ LSFLLSRKAA GLVSLQARLA
801: RFQHRLKEQE ILSRKKSSR

Best Arabidopsis Sequence Match ( AT3G16630.2 )
(BLAST)

001: MGGQMQQNNA AAATALYDGA LPTNDAGDAV MARWLQSAGL QHLASPVAST GNDQRHLPNL LMQGYGAQTA EEKQRLFQLM RNLNFNGEST SESYTPTAHT
101: SAAMPSSEGF FSPEFRGDFG AGLLDLHAMD DTELLSEHVI TEPFEPSPFM PSVNKEFEED YNLAANRQQR QQTEAEPLGL LPKSDKENNS VAKIKVVVRK
201: RPLNKKETAK KEEDVVTVSD NSLTVHEPRV KVDLTAYVEK HEFCFDAVLD EDVSNDEVYR ATIEPIIPII FQRTKATCFA YGQTGSGKTF TMKPLPIRAV
301: EDLMRLLRQP VYSNQRFKLW LSYFEIYGGK LFDLLSERKK LCMREDGRQQ VCIVGLQEYE VSDVQIVKDF IEKGNAERST GSTGANEESS RSHAILQLVV
401: KKHVEVKDTR RRNNDSNELP GKVVGKISFI DLAGSERGAD TTDNDRQTRI EGAEINKSLL ALKECIRALD NDQLHIPFRG SKLTEVLRDS FVGNSRTVMI
501: SCISPNAGSC EHTLNTLRYA DRVKSLSKSG NSKKDQTANS MPPVNKDPLL GPNDVEDVFE PPQEVNVPET RRRVVEKDSN SSTSGIDFRQ PTNYREESGI
601: PSFSMDKGRS EPNSSFAGST SQRNNISSYP QETSDREEKV KKVSPPRGKG LREEKPDRPQ NWSKRDVSSS DIPTLTNFRQ NASETASRQY ETASRQYETD
701: PSLDENLDAL LEEEEALIAA HRKEIEDTME IVREEMKLLA EVDQPGSMIE NYVTQLSFVL SRKAAGLVSL QARLARFQHR LKEQEILSRK RVPR

Arabidopsis Description

KIN13AKinesin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VP70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.