Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G112800.1 | Wheat | nucleus | 97.11 | 97.11 |
| TraesCS4A01G200200.1 | Wheat | nucleus | 89.16 | 96.71 |
| HORVU4Hr1G021000.7 | Barley | cytosol, nucleus | 77.6 | 93.55 |
| Os11t0157600-01 | Rice | cytosol, nucleus | 74.13 | 73.6 |
| EES08014 | Sorghum | nucleus | 68.64 | 68.15 |
| Zm00001d052781_P005 | Maize | nucleus | 66.76 | 66.57 |
| Zm00001d004875_P002 | Maize | nucleus | 64.74 | 64.46 |
| GSMUA_Achr2P06760_001 | Banana | nucleus | 42.92 | 44.59 |
| GSMUA_Achr9P08940_001 | Banana | nucleus | 34.1 | 35.87 |
| TraesCS5B01G320500.1 | Wheat | nucleus | 25.72 | 29.28 |
| TraesCS4B01G198700.1 | Wheat | nucleus | 26.59 | 24.27 |
| TraesCS6B01G253900.1 | Wheat | nucleus | 16.47 | 22.09 |
Protein Annotations
| MapMan:27.1.4 | Gene3D:3.40.50.12740 | InterPro:CCT_domain | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:IPR001789 | InterPro:IPR010402 | PFAM:PF00072 | PFAM:PF06203 | PFscan:PS50110 | PFscan:PS51017 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF4 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:TraesCS4B01G115100 |
| EnsemblPlants:TraesCS4B01G115100.1 | TIGR:cd00156 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4B:-:131707011..131713471
Molecular Weight (calculated)
75712.8 Da
IEP (calculated)
8.306
GRAVY (calculated)
-0.679
Length
692 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPDADAGEP AAAAAGAGGG AARGVIRWDE ILPRRSLRVL LVEHDDSTRQ VVTALLRKCG YRVAAVADGM KAWEVMRGRA YAFDLVLTEV NMPTLSGIDL
101: LSRIVAADEC KNIPVIMMSS QDSIGTVLKC MQNGAVDFLV KPVRKNELRN LWQHVWRRHS MNSQLNASEN NAASNHISVN SGIGSKTGEN SDEESDAQSS
201: GSKRETEIES VEKLPEIATH NGASSSRELK IQNGPFDRMN TKALALKGTD DAPSGNACGT SKLQVFSAEK NVFSKYLHGI TSAKVAGQIM DNAMRIADAS
301: SCRPSDPGKD LMATGQPTTS KKCKSPVTKN NAVKPVMENT LHENSKGAAI GHPQSCPSHL LDVNLGKQQR SDGHVNQELR DKDNFNHSNS SAFSRYGNKR
401: IEPSAKQLSL PSVHLTHQES VYDKNVQSSG TLPSHEHNTC KITMQAQAPL DSCTVGPAIP SSSSAREDAG TSSSSPRKDN FGHPPYGFIP VPLSVGAAIP
501: YQYSAIMPPI YYTQPPFMQC DPSGINQMGI QHAYHSSYHQ NLGKPSEIDE HRQLEENQRL HHSRQILQES GEPIDLLRAH AERNNQTASC SQDIRGWTVS
601: GETDTNTNTI IAPESGNESG IQNFGYNGLD SDRSRREAAL MKFRMKRKDR CFEKKVRYHS RKKLAEQRPR IKGQFVSQKL KSATTTEDAE TD
101: LSRIVAADEC KNIPVIMMSS QDSIGTVLKC MQNGAVDFLV KPVRKNELRN LWQHVWRRHS MNSQLNASEN NAASNHISVN SGIGSKTGEN SDEESDAQSS
201: GSKRETEIES VEKLPEIATH NGASSSRELK IQNGPFDRMN TKALALKGTD DAPSGNACGT SKLQVFSAEK NVFSKYLHGI TSAKVAGQIM DNAMRIADAS
301: SCRPSDPGKD LMATGQPTTS KKCKSPVTKN NAVKPVMENT LHENSKGAAI GHPQSCPSHL LDVNLGKQQR SDGHVNQELR DKDNFNHSNS SAFSRYGNKR
401: IEPSAKQLSL PSVHLTHQES VYDKNVQSSG TLPSHEHNTC KITMQAQAPL DSCTVGPAIP SSSSAREDAG TSSSSPRKDN FGHPPYGFIP VPLSVGAAIP
501: YQYSAIMPPI YYTQPPFMQC DPSGINQMGI QHAYHSSYHQ NLGKPSEIDE HRQLEENQRL HHSRQILQES GEPIDLLRAH AERNNQTASC SQDIRGWTVS
601: GETDTNTNTI IAPESGNESG IQNFGYNGLD SDRSRREAAL MKFRMKRKDR CFEKKVRYHS RKKLAEQRPR IKGQFVSQKL KSATTTEDAE TD
001: MGEIVVLSSD DGMETIKNRV KSSEVVQWEK YLPKTVLRVL LVESDYSTRQ IITALLRKCC YKVVAVSDGL AAWEVLKEKS HNIDLILTEL DLPSISGFAL
101: LALVMEHEAC KNIPVIMMSS QDSIKMVLKC MLRGAADYLI KPMRKNELKN LWQHVWRRLT LRDDPTAHAQ SLPASQHNLE DTDETCEDSR YHSDQGSGAQ
201: AINYNGHNKL MENGKSVDER DEFKETFDVT MDLIGGIDKR PDSIYKDKSR DECVGPELGL SLKRSCSVSF ENQDESKHQK LSLSDASAFS RFEESKSAEK
301: AVVALEESTS GEPKTPTESH EKLRKVTSDQ GSATTSSNQE NIGSSSVSFR NQVLQSTVTN QKQDSPIPVE SNREKAASKE VEAGSQSTNE GIAGQSSSTE
401: KPKEEESAKQ RWSRSQREAA LMKFRLKRKD RCFDKKVRYQ SRKKLAEQRP RVKGQFVRTV NSDASTKS
101: LALVMEHEAC KNIPVIMMSS QDSIKMVLKC MLRGAADYLI KPMRKNELKN LWQHVWRRLT LRDDPTAHAQ SLPASQHNLE DTDETCEDSR YHSDQGSGAQ
201: AINYNGHNKL MENGKSVDER DEFKETFDVT MDLIGGIDKR PDSIYKDKSR DECVGPELGL SLKRSCSVSF ENQDESKHQK LSLSDASAFS RFEESKSAEK
301: AVVALEESTS GEPKTPTESH EKLRKVTSDQ GSATTSSNQE NIGSSSVSFR NQVLQSTVTN QKQDSPIPVE SNREKAASKE VEAGSQSTNE GIAGQSSSTE
401: KPKEEESAKQ RWSRSQREAA LMKFRLKRKD RCFDKKVRYQ SRKKLAEQRP RVKGQFVRTV NSDASTKS
Arabidopsis Description
APRR9Two-component response regulator-like APRR9 [Source:UniProtKB/Swiss-Prot;Acc:Q8L500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.