Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4B01G115100.1 | Wheat | nucleus | 97.11 | 97.11 |
TraesCS4A01G200200.1 | Wheat | nucleus | 89.31 | 96.87 |
HORVU4Hr1G021000.7 | Barley | cytosol, nucleus | 77.75 | 93.73 |
Os11t0157600-01 | Rice | cytosol, nucleus | 73.55 | 73.03 |
EES08014 | Sorghum | nucleus | 68.21 | 67.72 |
Zm00001d052781_P005 | Maize | nucleus | 65.75 | 65.56 |
Zm00001d004875_P002 | Maize | nucleus | 64.02 | 63.74 |
GSMUA_Achr2P06760_001 | Banana | nucleus | 42.34 | 43.99 |
GSMUA_Achr9P08940_001 | Banana | nucleus | 34.25 | 36.02 |
TraesCS2D01G079600.2 | Wheat | nucleus | 25.58 | 26.3 |
TraesCS5D01G326200.3 | Wheat | nucleus | 23.12 | 25.68 |
TraesCS4D01G199600.1 | Wheat | nucleus | 26.59 | 24.12 |
TraesCS6D01G207100.2 | Wheat | endoplasmic reticulum, nucleus, plastid | 15.61 | 19.08 |
Protein Annotations
MapMan:27.1.4 | Gene3D:3.40.50.12740 | InterPro:CCT_domain | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
InterPro:IPR001789 | InterPro:IPR010402 | PFAM:PF00072 | PFAM:PF06203 | PFscan:PS50110 | PFscan:PS51017 |
PANTHER:PTHR43874 | PANTHER:PTHR43874:SF4 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:TraesCS4D01G112800 |
EnsemblPlants:TraesCS4D01G112800.1 | TIGR:cd00156 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4D:-:93450766..93457039
Molecular Weight (calculated)
75721.7 Da
IEP (calculated)
8.188
GRAVY (calculated)
-0.681
Length
692 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPDADAGEP AAAAAGAGGG AARGVIRWDE ILPRRSLRVL LVEHDDSTRQ VVTALLRKCG YRVAAVADGM KAWEVMRGRA YAFDLVLTEV NMPTLSGIDL
101: LSRIVAADEC KNIPVIMMSS QDSIGTVLKC MQNGAVDFLV KPVRKNELRN LWQHVWRRHS MNSQLNASEN NAASNHISVN SGSGSKTGEN SDEESDAQSS
201: GSKRETEIQI VEKLPEIVTH NGASSSRELK IQNGPFDRIN TKALALEGTD DAPSGNACGT SKPQVFSAEK NVHSKYLHGI TSAKVAGQIM DNAMRIADAS
301: SCRPSDPGKD LMATAQPTSS KKCKSPVTKN NAVKPVMENT LHENSKGAAI GHPQPCPSHS LDVNLGKQQR SDGHVNQELR DKDNFNHSNY SAFSRYGNKR
401: IEPSAKQLSL PSVHLTYQES VYDKNVQSSG ALPSHEHHTC KITMQAQAPL DSCTVGPAIP SSSSAREDAG TSSSSPRKDN FGHPPYGFIP VPISVGAAIP
501: YQYSAIMPPI YYTQPSFMQC DPSGINQMGI QHAYHSSYHQ NLGKPSEIDE HRQLEENQRL HHSRQILQES GEPIDLLRAH AERNNQSASC SQDIRGWTVS
601: GETDTNTNAI IAPESGNESG IQNFGYNGLD SDRSRREAAL MKFRMKRKDR CFEKKVRYHS RKKLAEQRPR IKGQFVSQKL KSATTTEDAE TD
101: LSRIVAADEC KNIPVIMMSS QDSIGTVLKC MQNGAVDFLV KPVRKNELRN LWQHVWRRHS MNSQLNASEN NAASNHISVN SGSGSKTGEN SDEESDAQSS
201: GSKRETEIQI VEKLPEIVTH NGASSSRELK IQNGPFDRIN TKALALEGTD DAPSGNACGT SKPQVFSAEK NVHSKYLHGI TSAKVAGQIM DNAMRIADAS
301: SCRPSDPGKD LMATAQPTSS KKCKSPVTKN NAVKPVMENT LHENSKGAAI GHPQPCPSHS LDVNLGKQQR SDGHVNQELR DKDNFNHSNY SAFSRYGNKR
401: IEPSAKQLSL PSVHLTYQES VYDKNVQSSG ALPSHEHHTC KITMQAQAPL DSCTVGPAIP SSSSAREDAG TSSSSPRKDN FGHPPYGFIP VPISVGAAIP
501: YQYSAIMPPI YYTQPSFMQC DPSGINQMGI QHAYHSSYHQ NLGKPSEIDE HRQLEENQRL HHSRQILQES GEPIDLLRAH AERNNQSASC SQDIRGWTVS
601: GETDTNTNAI IAPESGNESG IQNFGYNGLD SDRSRREAAL MKFRMKRKDR CFEKKVRYHS RKKLAEQRPR IKGQFVSQKL KSATTTEDAE TD
001: MGEIVVLSSD DGMETIKNRV KSSEVVQWEK YLPKTVLRVL LVESDYSTRQ IITALLRKCC YKVVAVSDGL AAWEVLKEKS HNIDLILTEL DLPSISGFAL
101: LALVMEHEAC KNIPVIMMSS QDSIKMVLKC MLRGAADYLI KPMRKNELKN LWQHVWRRLT LRDDPTAHAQ SLPASQHNLE DTDETCEDSR YHSDQGSGAQ
201: AINYNGHNKL MENGKSVDER DEFKETFDVT MDLIGGIDKR PDSIYKDKSR DECVGPELGL SLKRSCSVSF ENQDESKHQK LSLSDASAFS RFEESKSAEK
301: AVVALEESTS GEPKTPTESH EKLRKVTSDQ GSATTSSNQE NIGSSSVSFR NQVLQSTVTN QKQDSPIPVE SNREKAASKE VEAGSQSTNE GIAGQSSSTE
401: KPKEEESAKQ RWSRSQREAA LMKFRLKRKD RCFDKKVRYQ SRKKLAEQRP RVKGQFVRTV NSDASTKS
101: LALVMEHEAC KNIPVIMMSS QDSIKMVLKC MLRGAADYLI KPMRKNELKN LWQHVWRRLT LRDDPTAHAQ SLPASQHNLE DTDETCEDSR YHSDQGSGAQ
201: AINYNGHNKL MENGKSVDER DEFKETFDVT MDLIGGIDKR PDSIYKDKSR DECVGPELGL SLKRSCSVSF ENQDESKHQK LSLSDASAFS RFEESKSAEK
301: AVVALEESTS GEPKTPTESH EKLRKVTSDQ GSATTSSNQE NIGSSSVSFR NQVLQSTVTN QKQDSPIPVE SNREKAASKE VEAGSQSTNE GIAGQSSSTE
401: KPKEEESAKQ RWSRSQREAA LMKFRLKRKD RCFDKKVRYQ SRKKLAEQRP RVKGQFVRTV NSDASTKS
Arabidopsis Description
APRR9Two-component response regulator-like APRR9 [Source:UniProtKB/Swiss-Prot;Acc:Q8L500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.