Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G198700.1 | Wheat | nucleus | 93.71 | 94.33 |
| TraesCS4A01G105300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 82.31 | 94.29 |
| HORVU4Hr1G057550.2 | Barley | nucleus | 92.14 | 92.62 |
| Os03t0284100-01 | Rice | nucleus | 67.5 | 69.13 |
| EER92434 | Sorghum | nucleus | 68.68 | 68.5 |
| Zm00001d047761_P005 | Maize | nucleus | 67.89 | 67.62 |
| TraesCS2D01G079600.2 | Wheat | nucleus | 47.18 | 53.49 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.79 | 46.61 |
| GSMUA_Achr8P01990_001 | Banana | cytosol, nucleus, plastid | 44.3 | 45.68 |
| CDX80201 | Canola | nucleus | 27.26 | 44.16 |
| VIT_13s0067g03390.t01 | Wine grape | nucleus | 43.77 | 43.43 |
| GSMUA_Achr9P04240_001 | Banana | nucleus | 44.69 | 43.33 |
| CDY31578 | Canola | nucleus | 27.52 | 42.77 |
| Bra002512.1-P | Field mustard | nucleus | 27.13 | 42.77 |
| Solyc04g049670.2.1 | Tomato | nucleus | 34.34 | 41.39 |
| AT5G60100.2 | Thale cress | nucleus | 27.79 | 40.61 |
| TraesCS4D01G112800.1 | Wheat | nucleus | 24.12 | 26.59 |
| TraesCS5D01G326200.3 | Wheat | nucleus | 21.36 | 26.16 |
| TraesCS6D01G207100.2 | Wheat | endoplasmic reticulum, nucleus, plastid | 14.94 | 20.14 |
Protein Annotations
| MapMan:27.1.4 | Gene3D:3.40.50.2300 | InterPro:CCT_domain | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:IPR001789 | InterPro:IPR010402 | PFAM:PF00072 | PFAM:PF06203 | PFscan:PS50110 | PFscan:PS51017 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF12 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:TraesCS4D01G199600 |
| EnsemblPlants:TraesCS4D01G199600.1 | TIGR:cd00156 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4D:+:346446954..346451473
Molecular Weight (calculated)
83212.7 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.918
Length
763 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSAGQAGAD GPSTSDIRGT GNGAVENGHA LEANEDKEWR GGIKEEDWPS THSAPPGLDE QKQQQDRVIR WEKFLPVKTL RVLLVENDDC TRHVVRALLR
101: KCGYEVISAE NGLHAWQYLE DVQNRIDLVL TEVAMPCLSG IGLLSKITSH SICKGIPVIM MSKNDSMSTV FRCLSKGAVD FLVKPIRKNE LKTLWQHIWR
201: RCHSSSGSES GIHTQKCSKP KAGDEYENNS HDDDDDCGSH DDDDDDDDDA DDDFSVGPNA RDGSDNGSGT QSSWTKRAVE IDSPQLLSSD HLAESPDSTC
301: AQVIHPRSEI GSNRWLPTAN KRNINNQKEN NDDSMGKYLE IGAPRNSSLG YQSSPNEMSV NPTEKQHENL TSQNKSVNKI VIDKPTCQTA DLISSIARNT
401: ESKQAARITD APDCSSKMPN GNEMKNDSPI NMPSQELGLK ISETTRCETE IHDERSIPKR SNLSAFTRYH TPMASDQGGA TFRGSCSPQD NSSEAVKTNS
501: TCKMESNSDA AQIKQGSNGS SNNNDMGSST KSAIAKPCTD RERVMLPSLV KSNQQTSAFH PVQHQVSPAH VARKDKAAEE IANAVKVGHS SEAQQSSVQH
601: HHHAHYYRHV MAQQQTLIDG ASNARCGSSN ASDSPMEGHA ANYGVNVSVS GSNNGSNTQN GSSSAPNIAR PNMESGTMDK IEADGGNGSG SRPSGSGNDM
701: VCQNQLSQRE AAVNKFRQKR KERNFGKKVR YQSRKRLAEQ RPRVRGQFVR QSGQDEAGQA EDG
101: KCGYEVISAE NGLHAWQYLE DVQNRIDLVL TEVAMPCLSG IGLLSKITSH SICKGIPVIM MSKNDSMSTV FRCLSKGAVD FLVKPIRKNE LKTLWQHIWR
201: RCHSSSGSES GIHTQKCSKP KAGDEYENNS HDDDDDCGSH DDDDDDDDDA DDDFSVGPNA RDGSDNGSGT QSSWTKRAVE IDSPQLLSSD HLAESPDSTC
301: AQVIHPRSEI GSNRWLPTAN KRNINNQKEN NDDSMGKYLE IGAPRNSSLG YQSSPNEMSV NPTEKQHENL TSQNKSVNKI VIDKPTCQTA DLISSIARNT
401: ESKQAARITD APDCSSKMPN GNEMKNDSPI NMPSQELGLK ISETTRCETE IHDERSIPKR SNLSAFTRYH TPMASDQGGA TFRGSCSPQD NSSEAVKTNS
501: TCKMESNSDA AQIKQGSNGS SNNNDMGSST KSAIAKPCTD RERVMLPSLV KSNQQTSAFH PVQHQVSPAH VARKDKAAEE IANAVKVGHS SEAQQSSVQH
601: HHHAHYYRHV MAQQQTLIDG ASNARCGSSN ASDSPMEGHA ANYGVNVSVS GSNNGSNTQN GSSSAPNIAR PNMESGTMDK IEADGGNGSG SRPSGSGNDM
701: VCQNQLSQRE AAVNKFRQKR KERNFGKKVR YQSRKRLAEQ RPRVRGQFVR QSGQDEAGQA EDG
001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
Arabidopsis Description
APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.