Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G198700.1 | Wheat | nucleus | 93.28 | 93.4 |
| TraesCS4A01G105300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 80.9 | 92.19 |
| TraesCS4D01G199600.1 | Wheat | nucleus | 92.62 | 92.14 |
| Os03t0284100-01 | Rice | nucleus | 67.98 | 69.26 |
| EER92434 | Sorghum | nucleus | 69.17 | 68.63 |
| Zm00001d047761_P005 | Maize | nucleus | 68.77 | 68.15 |
| HORVU2Hr1G013400.34 | Barley | cytosol, nucleus, plastid | 46.77 | 51.37 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.17 | 46.74 |
| GSMUA_Achr8P01990_001 | Banana | cytosol, nucleus, plastid | 45.19 | 46.35 |
| CDX80201 | Canola | nucleus | 27.27 | 43.95 |
| GSMUA_Achr9P04240_001 | Banana | nucleus | 45.45 | 43.84 |
| VIT_13s0067g03390.t01 | Wine grape | nucleus | 44.27 | 43.69 |
| Bra002512.1-P | Field mustard | nucleus | 27.27 | 42.77 |
| CDY31578 | Canola | nucleus | 27.54 | 42.57 |
| Solyc04g049670.2.1 | Tomato | nucleus | 34.52 | 41.39 |
| AT5G60100.2 | Thale cress | nucleus | 27.8 | 40.42 |
| HORVU5Hr1G081620.4 | Barley | nucleus | 23.19 | 28.53 |
| HORVU6Hr1G057630.1 | Barley | nucleus | 15.94 | 23.18 |
| HORVU4Hr1G021000.7 | Barley | cytosol, nucleus | 16.34 | 21.6 |
Protein Annotations
| MapMan:27.1.4 | Gene3D:3.40.50.2300 | EMBL:AK376549 | InterPro:CCT_domain | InterPro:CheY-like_superfamily | UniProt:F2EK72 |
| GO:GO:0000160 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU4Hr1G057550 | EnsemblPlants:HORVU4Hr1G057550.2 | InterPro:IPR001789 | InterPro:IPR010402 | PFAM:PF00072 | PFAM:PF06203 |
| PFscan:PS50110 | PFscan:PS51017 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF12 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI000200915C | SEG:seg | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EK72]
Coordinates
chrchr4H:-:482660376..482666037
Molecular Weight (calculated)
82761.5 Da
IEP (calculated)
7.488
GRAVY (calculated)
-0.923
Length
759 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSAGQAGAD GPSSSDIRGI GNGAVENQNG HALKPNEDKE WRGGSKEEDW PSTHSAPPGL DEHKQQQQDR VIRWEKFLPV KTLRVLLVEN DDCTRHVVRA
101: LLRKCGYEVI SAENGLDAWQ YLEDVQNRID LVLTEVAMPC LSGIGLLSKI TSHSICKGIP VIMMSKNDSM STVFKCLSKG AVDFLVKPIR KNELKTLWQH
201: IWRRCHSSSG SESGIHIQKC SKPKTGDEYA KNSGGSHDDD DDDDADDDFS VGPNARDGSD NGSGTQSSWT KRAVEIDSPQ LVSSDHLSDS PDSTCAQVIH
301: PRSEIGSNRW LPTANKRNIN NQKEKNDDSM GKYLEIGAPR NSSLAYQSSP NEMSVNPTEK QHENLISKNK SVDKIVIDKP TSETADLISS IARNTESKQA
401: ARITDAPDCS SKMPHGNEMN NDSPINMPSK ELGLKISETT RRGTEIHDER SILKRSNLSA FTRYHTPMAS DQGGATFRGS CSPQDNSSEA VKTNSTCKME
501: SNSDAAQIKQ GSNGSSNNND MGSSTKNANT KPCTDRERVM PPSLVKSNQQ TSAFHPVQHQ VSPADAVGKD KAAEEIANAV KVDHSSEAQQ SSVQHHHHGH
601: YYRHVMVQQQ TLIDRASNAR CGSSNASDSP MEGHAANYGV NGSISGSNNG SNTQNRSSFA PNIARPNMES GTMDKTEAGG GNGSGSGPSG SGTDLVCQNQ
701: LSQREAAVNK FRQKRKERNF GKKVRYQSRK RLAEQRPRVR GQFVRQSGQE DEAGQAADR
101: LLRKCGYEVI SAENGLDAWQ YLEDVQNRID LVLTEVAMPC LSGIGLLSKI TSHSICKGIP VIMMSKNDSM STVFKCLSKG AVDFLVKPIR KNELKTLWQH
201: IWRRCHSSSG SESGIHIQKC SKPKTGDEYA KNSGGSHDDD DDDDADDDFS VGPNARDGSD NGSGTQSSWT KRAVEIDSPQ LVSSDHLSDS PDSTCAQVIH
301: PRSEIGSNRW LPTANKRNIN NQKEKNDDSM GKYLEIGAPR NSSLAYQSSP NEMSVNPTEK QHENLISKNK SVDKIVIDKP TSETADLISS IARNTESKQA
401: ARITDAPDCS SKMPHGNEMN NDSPINMPSK ELGLKISETT RRGTEIHDER SILKRSNLSA FTRYHTPMAS DQGGATFRGS CSPQDNSSEA VKTNSTCKME
501: SNSDAAQIKQ GSNGSSNNND MGSSTKNANT KPCTDRERVM PPSLVKSNQQ TSAFHPVQHQ VSPADAVGKD KAAEEIANAV KVDHSSEAQQ SSVQHHHHGH
601: YYRHVMVQQQ TLIDRASNAR CGSSNASDSP MEGHAANYGV NGSISGSNNG SNTQNRSSFA PNIARPNMES GTMDKTEAGG GNGSGSGPSG SGTDLVCQNQ
701: LSQREAAVNK FRQKRKERNF GKKVRYQSRK RLAEQRPRVR GQFVRQSGQE DEAGQAADR
001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
Arabidopsis Description
APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.