Factsheet for HORVU2Hr1G013400.34

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G199500.3	Wheat	nucleus	58.03	90.72
TraesCS2A01G081900.2	Wheat	nucleus	88.86	90.56
TraesCS2D01G079600.2	Wheat	nucleus	88.13	90.49
TraesCSU01G196100.2	Wheat	nucleus	88.28	90.1
TraesCSU01G221500.1	Wheat	nucleus	54.56	85.49
Os07t0695100-01	Rice	nucleus	65.56	61.05
Zm00001d007240_P001	Maize	nucleus	49.78	58.11
OQU81435	Sorghum	mitochondrion	23.73	56.36
HORVU4Hr1G057550.2	Barley	nucleus	51.37	46.77
GSMUA_Achr8P01990_001	Banana	cytosol, nucleus, plastid	45.01	42.03
GSMUA_AchrUn_...	Banana	nucleus	46.02	41.51
Solyc04g049670.2.1	Tomato	nucleus	35.75	39.02
CDY31578	Canola	nucleus	27.35	38.49
VIT_13s0067g03390.t01	Wine grape	nucleus	42.84	38.49
CDX80201	Canola	nucleus	26.19	38.43
Bra002512.1-P	Field mustard	nucleus	26.63	38.02
GSMUA_Achr9P04240_001	Banana	nucleus	43.13	37.87
AT5G60100.2	Thale cress	nucleus	27.5	36.4
HORVU5Hr1G081620.4	Barley	nucleus	22.43	25.12
HORVU4Hr1G021000.7	Barley	cytosol, nucleus	18.09	21.78
HORVU6Hr1G057630.1	Barley	nucleus	15.92	21.07

Protein Annotations

MapMan:27.1.4	Gene3D:3.40.50.2300	UniProt:A0A287H4A1	InterPro:CCT_domain	InterPro:CheY-like_superfamily	GO:GO:0000003
GO:GO:0000160	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0048579	EnsemblPlantsGene:HORVU2Hr1G013400	EnsemblPlants:HORVU2Hr1G013400.34
InterPro:IPR001789	InterPro:IPR010402	PFAM:PF00072	PFAM:PF06203	PFscan:PS50110	PFscan:PS51017
PANTHER:PTHR43874	PANTHER:PTHR43874:SF12	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000B46C3DD
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:29124249..29127457

Molecular Weight (calculated)

74358.4 Da

IEP (calculated)

8.088

GRAVY (calculated)

-0.788

Length

691 amino acids

Sequence
(BLAST)

001: CCCWLLPPRQ PPPNDPNMFP LGARQPPPSA MDNQQQQQPP RGEHAAQPRC WEEFLHRKTI RVLLVETDDS TRQVVAALLR HCMYQVIPVE NGHQAWAYLQ
101: DMQSNIDLVL TEVFMHGGLS GIDLLGRIMN HEVCKDIPVI MMSSHDSMGT VLSCLSNGAA DFLAKPIRKN ELKNLWAHVW RRSHSSSGSG SGSAIQTQKC
201: TKSKSGDDSN NNSNDRNDDA SMGLNARDGS DNGSGTQAQS SWTKRAVEID SPQDMSPDQS ADPPEGTCAH VNHPKSEICS NRWLPGTNNK KCQKPKETSD
301: GFKGKELEIG APGNLNTDDQ SSPNESSVKP TDGRCEYLPQ NNSSDTVMEN LEEPIVRAAD LIGSMAKNMD AQQAAARAID APNCSLQASE GKDTDGENAM
401: PYLELSLKRS RSTGEGAGPI QEEQRNVVRR SDLSAFTRYN MCAVSNQGGA GFVGSCSPNG DSSEAAKTVA AQMKQGSNGS SNNNDMGSTT KSVVTKPCGN
501: NKVSPINGNT HTSAFHRVQP WTPATAAGKD KADEVSKKNV AAAAAAAKEM GCEAQSKHPC AAADDVNGGS AGGTAQSSVV NPSGPVEGHT ANYGSNSFSN
601: NNTNNGSTAA TTAAAAAVHA ETGGGVDKRS NMMNMKRERR VAAVNKFREK RKERNFGKKV RYQSRKRLAE QRPRVRWQFV RQPPAPATVE R

Best Arabidopsis Sequence Match ( AT5G02810.1 )
(BLAST)

001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS

Arabidopsis Description

APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.