Factsheet for TraesCSU01G221500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G199500.3	Wheat	nucleus	91.84	91.63
TraesCSU01G196100.2	Wheat	nucleus	93.2	60.71
TraesCS2D01G079600.2	Wheat	nucleus	89.8	58.84
TraesCS2A01G081900.2	Wheat	nucleus	90.25	58.7
OQU81435	Sorghum	mitochondrion	36.73	55.67
HORVU2Hr1G013400.34	Barley	cytosol, nucleus, plastid	85.49	54.56
Os07t0695100-01	Rice	nucleus	67.35	40.03
Zm00001d007240_P001	Maize	nucleus	46.49	34.63
CDY31578	Canola	nucleus	31.97	28.72
CDX80201	Canola	nucleus	30.39	28.45
Bra002512.1-P	Field mustard	nucleus	31.07	28.31
AT5G60100.2	Thale cress	nucleus	32.65	27.59
GSMUA_Achr8P01990_001	Banana	cytosol, nucleus, plastid	45.58	27.16
GSMUA_AchrUn_...	Banana	nucleus	47.17	27.15
GSMUA_Achr9P04240_001	Banana	nucleus	44.9	25.16
VIT_13s0067g03390.t01	Wine grape	nucleus	43.76	25.1
Solyc04g049670.2.1	Tomato	nucleus	31.52	21.96

Protein Annotations

EnsemblPlants:TraesCSU01G221500.1	EnsemblPlantsGene:TraesCSU01G221500	Gene3D:3.40.50.2300	GO:GO:0000160	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:CheY-like_superfamily	InterPro:IPR001789	InterPro:Sig_transdc_resp-reg_receiver	PANTHER:PTHR43874
PANTHER:PTHR43874:SF12	PFAM:PF00072	PFscan:PS50110	SEG:seg	SMART:SM00448	SUPFAM:SSF52172
TIGR:cd00156	MapMan:27.1.4	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:327630566..327632807

Molecular Weight (calculated)

48762.8 Da

IEP (calculated)

6.415

GRAVY (calculated)

-0.696

Length

441 amino acids

Sequence
(BLAST)

001: MFPLGVRPPP PSAMDRHHHQ QQQQPPSPQG DHAAQPRCWE EFLHRKTIRV LLVETDDSTR QVVTALLRHC MYQVIPAENG HQAWAYLQDM QSNIDLVLTE
101: VFMHGGLSGI DLLGRIMNHE VCKDIPVISK HPLAAIMFQY QVHFVHVHRF ISSWFPVMSS HNSMGTVLSC LSNGAADFLA KPIRKNELKN LWAHVWRRSH
201: SSSGSGSGSA IQTQKCTKSK SADDSNNNSN NRNDDASMGL NARDGSDNGS GTQSSWTKRA VEIDSPQDMS PDQSVDPPDS TCAHVSHLKS EICSNRLRGD
301: EFKGKELEIG APGNLNTDDQ SSPNESSVKP TDNGRCEYLP QNNSNDTVME NSDEPIVRAA DLIGSMAKNM DAQQAARAID APNCSSQVPE GKDADRENAM
401: PYLELSLKRS RSTTEGADAI QEEQRNVVRR SDLSAFTRCK A

Best Arabidopsis Sequence Match ( AT5G02810.1 )
(BLAST)

001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS

Arabidopsis Description

APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.