Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G199500.3 | Wheat | nucleus | 64.99 | 99.55 |
| TraesCS2A01G081900.2 | Wheat | nucleus | 95.42 | 95.28 |
| TraesCS2D01G079600.2 | Wheat | nucleus | 93.8 | 94.35 |
| TraesCSU01G221500.1 | Wheat | nucleus | 60.71 | 93.2 |
| HORVU2Hr1G013400.34 | Barley | cytosol, nucleus, plastid | 90.1 | 88.28 |
| Os07t0695100-01 | Rice | nucleus | 68.09 | 62.13 |
| Zm00001d007240_P001 | Maize | nucleus | 50.52 | 57.77 |
| OQU81435 | Sorghum | mitochondrion | 24.08 | 56.01 |
| GSMUA_Achr8P01990_001 | Banana | cytosol, nucleus, plastid | 46.23 | 42.3 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.27 | 41.78 |
| VIT_13s0067g03390.t01 | Wine grape | nucleus | 44.61 | 39.27 |
| Solyc04g049670.2.1 | Tomato | nucleus | 36.63 | 39.18 |
| CDY31578 | Canola | nucleus | 27.77 | 38.29 |
| GSMUA_Achr9P04240_001 | Banana | nucleus | 44.46 | 38.25 |
| CDX80201 | Canola | nucleus | 26.59 | 38.22 |
| Bra002512.1-P | Field mustard | nucleus | 27.18 | 38.02 |
| AT5G60100.2 | Thale cress | nucleus | 28.07 | 36.4 |
Protein Annotations
| MapMan:27.1.4 | Gene3D:3.40.50.2300 | InterPro:CCT_domain | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:IPR001789 | InterPro:IPR010402 | PFAM:PF00072 | PFAM:PF06203 | PFscan:PS50110 | PFscan:PS51017 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF12 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:TraesCSU01G196100 |
| EnsemblPlants:TraesCSU01G196100.2 | TIGR:cd00156 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrUn:-:293689186..293692277
Molecular Weight (calculated)
72801.3 Da
IEP (calculated)
8.702
GRAVY (calculated)
-0.868
Length
677 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPLGVRPPP PSAMDRHHHQ QQQQPPSPQG DHAAQPRCWE EFLHRKTIRV LLVETDDSTR QVVTALLRHC MYQVIPAENG HQAWAYLQDM QSNIDLVLTE
101: VFMHGGLSGI DLLGRIMNHE VCKDIPVIMM SSHNSMGTVL SCLSNGAADF LAKPIRKNEL KNLWAHVWRR SHSSSGSGSG SAIQTQKCTK SKSADDSNNN
201: SNNRNDDASM GLNARDGSDN GSGTQSSWTK RAVEIDSPQD MSPDQSVDPP DSTCAHVSHL KSEICSNRLR GTDNKKCQKP KETNGDEFKG KELEIGAPGN
301: LNTDDQSSPN ESSVKPTDNG RCEYLPQNNS NDTVMENSDE PIVRAADLIG SMAKNMDAQQ AARAIDAPNC SSQVPEGKDA DRENAMPYLE LSLKRSRSTT
401: EGADAIQEEQ RNVVRRSDLS AFTRYNTCSF SNQGGAGFVG SCSPNGNSSK AAKTDAAQMK QGSNGSSNNN DMGSTTKSVM TKPGGNNKVS PINGNTHTSA
501: FHRVQPWTPA TATGKDKVDD VSKKNAAAAA AAAAKDNGGE AQSKHPCAAA HDANGGSAGG AQSNVINPSG PVEGHAANYG SNSGSNNNTN NGGSTAATAA
601: AAAAVHGETG GIDKRSNMMH MKRERRVAAV NKFREKRKER NFGKKVRYQS RKRLAEQRPR VRGQFVRQPP PPAAVER
101: VFMHGGLSGI DLLGRIMNHE VCKDIPVIMM SSHNSMGTVL SCLSNGAADF LAKPIRKNEL KNLWAHVWRR SHSSSGSGSG SAIQTQKCTK SKSADDSNNN
201: SNNRNDDASM GLNARDGSDN GSGTQSSWTK RAVEIDSPQD MSPDQSVDPP DSTCAHVSHL KSEICSNRLR GTDNKKCQKP KETNGDEFKG KELEIGAPGN
301: LNTDDQSSPN ESSVKPTDNG RCEYLPQNNS NDTVMENSDE PIVRAADLIG SMAKNMDAQQ AARAIDAPNC SSQVPEGKDA DRENAMPYLE LSLKRSRSTT
401: EGADAIQEEQ RNVVRRSDLS AFTRYNTCSF SNQGGAGFVG SCSPNGNSSK AAKTDAAQMK QGSNGSSNNN DMGSTTKSVM TKPGGNNKVS PINGNTHTSA
501: FHRVQPWTPA TATGKDKVDD VSKKNAAAAA AAAAKDNGGE AQSKHPCAAA HDANGGSAGG AQSNVINPSG PVEGHAANYG SNSGSNNNTN NGGSTAATAA
601: AAAAVHGETG GIDKRSNMMH MKRERRVAAV NKFREKRKER NFGKKVRYQS RKRLAEQRPR VRGQFVRQPP PPAAVER
001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
Arabidopsis Description
APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.