Factsheet for GSMUA_AchrUn_randomP10310_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P01990_001	Banana	cytosol, nucleus, plastid	70.76	73.24
GSMUA_Achr9P04240_001	Banana	nucleus	68.93	67.09
OQU81435	Sorghum	mitochondrion	21.28	56.01
VIT_13s0067g03390.t01	Wine grape	nucleus	54.05	53.84
Os07t0695100-01	Rice	nucleus	50.91	52.56
Solyc04g049670.2.1	Tomato	nucleus	42.3	51.18
Zm00001d007240_P001	Maize	nucleus	39.43	51.01
TraesCSU01G199500.3	Wheat	nucleus	28.85	50.0
Os03t0284100-01	Rice	nucleus	47.52	48.86
CDX80201	Canola	nucleus	29.9	48.62
TraesCS4A01G105300.1	Wheat	cytosol, mitochondrion, nucleus, plastid	42.17	48.5
Bra002512.1-P	Field mustard	nucleus	30.55	48.35
CDY31578	Canola	nucleus	30.94	48.27
EER92434	Sorghum	nucleus	48.04	48.1
Zm00001d047761_P005	Maize	nucleus	47.91	47.91
TraesCS4B01G198700.1	Wheat	nucleus	47.39	47.89
TraesCS2A01G081900.2	Wheat	nucleus	42.04	47.49
TraesCSU01G196100.2	Wheat	nucleus	41.78	47.27
HORVU4Hr1G057550.2	Barley	nucleus	46.74	47.17
TraesCSU01G221500.1	Wheat	nucleus	27.15	47.17
TraesCS4D01G199600.1	Wheat	nucleus	46.61	46.79
TraesCS2D01G079600.2	Wheat	nucleus	40.73	46.36
HORVU2Hr1G013400.34	Barley	cytosol, nucleus, plastid	41.51	46.02
AT5G60100.2	Thale cress	nucleus	30.55	44.83
GSMUA_Achr9P08940_001	Banana	nucleus	26.24	30.55
GSMUA_Achr2P06760_001	Banana	nucleus	25.59	29.43
GSMUA_Achr9P24280_001	Banana	nucleus	23.5	26.95
GSMUA_Achr4P04970_001	Banana	nucleus	22.32	26.23
GSMUA_Achr4P05170_001	Banana	nucleus	23.63	23.66
GSMUA_Achr10P...	Banana	nucleus	16.19	22.88
GSMUA_Achr9P19550_001	Banana	nucleus	15.67	22.77
GSMUA_Achr2P04570_001	Banana	nucleus	15.8	22.04

Protein Annotations

MapMan:27.1.4	Gene3D:3.40.50.2300	InterPro:CCT_domain	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_AchrUn_randomG10310_001	EnsemblPlants:GSMUA_AchrUn_randomP10310_001
EnsemblPlants:GSMUA_AchrUn_randomT10310_001	InterPro:IPR001789	InterPro:IPR010402	UniProt:M0U7Z0	PFAM:PF00072	PFAM:PF06203
PFscan:PS50110	PFscan:PS51017	PANTHER:PTHR43874	PANTHER:PTHR43874:SF12	SMART:SM00448	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI00029666C8	SEG:seg	:	:	:

Description

Two-component response regulator-like PRR73 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG10310_001]

Coordinates

chrchrUn_random:-:49831572..49849691

Molecular Weight (calculated)

82366.0 Da

IEP (calculated)

7.415

GRAVY (calculated)

-0.745

Length

766 amino acids

Sequence
(BLAST)

001: MGGAHQVSPD GGRNKGLASS SHRDQNEYKE VADAAAEEGQ GLSEEDESKI NEAVGGLNHN QIGDAVPPEQ QSGGLQKQQQ QQSPGPIIRW ERFLPIRTLK
101: ILLVEYDDST RQVVSALLRN CSYEVTAVAN GLQAWKILAD LTNHIDLVLT EVVMPGLTGI GLLSKIMNHK TCKNIPVIMM SSNDSMGTVF KCLSKGAVDF
201: LLKPIRKNEL KNLWQHVWRR CHSSSSSGSE SGIQTQKSVK SKSSDDSDNN SGSNDDDNGS VGFNARDGSD NGSGTQSSWT KRAAEVDSSQ PISSSDRLAD
301: PPDSTCAQVI HATPKTFCKD LLPTSANREN QDDCMGKDLE IGVCRAPEMQ NETNPSEQHC TKQTDTIVDK LSAKDPKNEG LLSTLCNNLF DDSSAQAANL
401: TGAIDNSSDT QVATGAIQTL SGFSKISEGQ NKINYTSKDL LPLELSLKRL RSIGESGTAT QDDRNVVRRS DLSAFSRYHT SAASNQAPIG GGGSFSPLDN
501: SSEAIKTVST NNFISGSNVA FLKQGSNGSS NNNDMGSYTK NVFTKPASYK DKAASSLLVK CAQTSAFHPV QYRASESQEP VQENVENVTT ASATGHLRDI
601: HHQQHKPQLP QNCSDLSLKN NAGAAPQCGS SSVFNGPVER NAANYFINGS HSGSNHGSNG NNGSSTSIQT GGLNMESANG IAEQNGPGSG NGSGSGSGSG
701: IDQNRLAQRE AALKKFRQKR KERNYGKKVR YQSRKRLAEQ RPRVRGQFVR QSMHEHTSLD AERWPS

Best Arabidopsis Sequence Match ( AT5G02810.1 )
(BLAST)

001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS

Arabidopsis Description

APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.