Factsheet for GSMUA_Achr4P05170_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P04570_001
GSMUA_Achr9P19550_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46790.1	GSMUA_Achr10P...	AT5G61380.1	20407420
AT2G46790.1	GSMUA_Achr2P04570_001	AT5G61380.1	20407420
AT2G46790.1	GSMUA_Achr9P19550_001	AT5G61380.1	20407420
AT5G24470.1	GSMUA_Achr10P...	AT5G61380.1	20407420
AT5G24470.1	GSMUA_Achr2P04570_001	AT5G61380.1	20407420
AT5G24470.1	GSMUA_Achr9P19550_001	AT5G61380.1	20407420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P04970_001	Banana	nucleus	52.55	61.66
GSMUA_Achr9P24280_001	Banana	nucleus	50.07	57.34
Os09t0532400-01	Rice	nucleus	33.2	40.77
HORVU5Hr1G081620.4	Barley	nucleus	32.68	40.52
EER99234	Sorghum	nucleus	33.33	40.48
TraesCS5A01G320300.1	Wheat	nucleus	32.03	40.36
TraesCS5B01G320500.1	Wheat	nucleus	31.9	40.13
CDY41558	Canola	nucleus	21.57	40.05
Bra004507.1-P	Field mustard	nucleus	21.44	39.81
Zm00001d006212_P002	Maize	nucleus	32.29	39.08
CDX80047	Canola	nucleus	19.48	37.53
Zm00001d021291_P002	Maize	mitochondrion, plastid	33.2	37.41
CDY59590	Canola	nucleus	23.79	37.37
CDY48015	Canola	nucleus	21.7	36.01
TraesCS5D01G326200.3	Wheat	nucleus	29.28	35.96
AT2G46790.1	Thale cress	nucleus	21.96	35.9
CDY19831	Canola	nucleus	22.48	34.61
Bra036517.1-P	Field mustard	nucleus	22.48	34.61
CDY05436	Canola	nucleus	22.75	34.46
Bra029407.1-P	Field mustard	nucleus	22.88	34.38
VIT_15s0048g02540.t01	Wine grape	nucleus	28.5	34.01
Zm00001d016258_P001	Maize	cytosol	9.15	33.82
CDX87123	Canola	nucleus	22.09	33.14
AT5G24470.1	Thale cress	cytosol, nucleus, plastid	23.66	32.44
Bra009768.1-P	Field mustard	nucleus	23.66	32.15
CDX80448	Canola	nucleus	23.14	31.78
PGSC0003DMT400029402	Potato	nucleus	25.23	30.16
VIT_16s0098g00900.t01	Wine grape	nucleus	26.67	29.65
Solyc03g081240.2.1	Tomato	nucleus	25.88	29.12
KRH64297	Soybean	nucleus	26.27	29.09
KRH53629	Soybean	nucleus	26.41	28.86
KRG97248	Soybean	nucleus	25.75	28.76
KRH06354	Soybean	nucleus	26.54	28.75
Solyc10g005030.2.1	Tomato	nucleus	24.05	28.53
KRH47791	Soybean	nucleus	26.8	28.39
GSMUA_Achr9P08940_001	Banana	nucleus	24.31	28.27
KRH68964	Soybean	nucleus	25.1	27.75
GSMUA_Achr2P06760_001	Banana	nucleus	23.66	27.18
PGSC0003DMT400001574	Potato	nucleus	23.92	26.79
CDX88107	Canola	plastid	24.18	26.58
GSMUA_Achr8P01990_001	Banana	cytosol, nucleus, plastid	23.01	23.78
GSMUA_AchrUn_...	Banana	nucleus	23.66	23.63
GSMUA_Achr9P04240_001	Banana	nucleus	22.61	21.98
GSMUA_Achr10P...	Banana	nucleus	14.9	21.03
GSMUA_Achr9P19550_001	Banana	nucleus	13.86	20.11
GSMUA_Achr2P04570_001	Banana	nucleus	13.99	19.49
CDY27522	Canola	nucleus	21.83	19.4
Bra040484.1-P	Field mustard	cytosol	19.22	17.84

Protein Annotations

MapMan:27.1.4	Gene3D:3.40.50.2300	InterPro:CCT_domain	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G05170_001	EnsemblPlants:GSMUA_Achr4P05170_001
EnsemblPlants:GSMUA_Achr4T05170_001	InterPro:IPR001789	InterPro:IPR010402	UniProt:M0SL84	PFAM:PF00072	PFAM:PF06203
PFscan:PS50110	PFscan:PS51017	PANTHER:PTHR43874	PANTHER:PTHR43874:SF11	SMART:SM00448	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000296A5BC	SEG:seg	:	:	:

Description

Putative Two-component response regulator-like PRR95 [Source:GMGC_GENE;Acc:GSMUA_Achr4G05170_001]

Coordinates

chr4:+:3993316..4000605

Molecular Weight (calculated)

85459.3 Da

IEP (calculated)

6.898

GRAVY (calculated)

-0.654

Length

765 amino acids

Sequence
(BLAST)

001: MRRPARSLEH LPKSPGTWRV EDDQLRVESD AGQGKYLNSW PSSRHVTAGP ADHGWRQTRC TLTWPARHRE KIFSSRGYLV AAEAWIAAVS LTSPTREPRG
101: AKEQTAVAWL GLEVDMGAKE ERGRSGEEEA EAEAVVAGEG EVEEEEMVLP NMSVRVLLVE GDDSTRQIIA ALLRKCGYRE VPFVWIAASS SDGLKAWETL
201: REKPQSIDLV LTEVDLPSVS GYGLLSMIMD HETCRNIPVI MMSSHDSVSI VFKCMLKGAA DFLIKPIRKN ELRNLWQHVW RRQIASGQSG VHEIQDKCDA
301: KHKLKAHSRK GGHSTDYTYK ECSDAQSSCA RSDVATDIKH NHLELKQRKA VEASVTLNDG ENIQFYNAPF YNENAANGTI FPSKNVDVIQ KECMDSNTIT
401: NEKDGQKCYH DITSIIRVID NQSKGTLQSR GRNTVQSGSS DMAIHDIDVI HKSCPTPHLE LSLKRCERIF PEKHDYDEIN VWNHSNSSAF SLYNSRTVMP
501: TSMNSGSKGN DPNCTEHSKY QGSTINMEET TFEVVEHSVQ CNPLQVIPFT LPVGSMPLCS EYDTAMQHMI YTESDHKFWS TSPSVWLKTT TETNSSHQPT
601: QEDQDSVEGG IPDGKNTRSS SYHNVQEQEE HMEVDKQRHI LSAAGESGSS SICNGGRSQP NSSASGGVLS GTTGHTFATN IFGPITVTVN DEVKLAREGT
701: KVTDGSMSQR EMALNKFRLK RKERCFEKKV RYHARKLLAE QRPRVKGQFV RQAKLNPQPT FAGAF

Best Arabidopsis Sequence Match ( AT5G24470.1 )
(BLAST)

001: MTSSEEVVEV TVVKAPEAGG GKLSRRKIRK KDAGVDGLVK WERFLPKIAL RVLLVEADDS TRQIIAALLR KCSYRVAAVP DGLKAWEMLK GKPESVDLIL
101: TEVDLPSISG YALLTLIMEH DICKNIPVIM MSTQDSVNTV YKCMLKGAAD YLVKPLRRNE LRNLWQHVWR RQTSLAPDSF PWNESVGQQK AEGASANNSN
201: GKRDDHVVSG NGGDAQSSCT RPEMEGESAD VEVSARDAVQ MECAKSQFNE TRLLANELQS KQAEAIDFMG ASFRRTGRRN REESVAQYES RIELDLSLRR
301: PNASENQSSG DRPSLHPSSA SAFTRYVHRP LQTQCSASPV VTDQRKNVAA SQDDNIVLMN QYNTSEPPPN APRRNDTSFY TGADSPGPPF SNQLNSWPGQ
401: SSYPTPTPIN NIQFRDPNTA YTSAMAPASL SPSPSSVSPH EYSSMFHPFN SKPEGLQDRD CSMDVDERRY VSSATEHSAI GNHIDQLIEK KNEDGYSLSV
501: GKIQQSLQRE AALTKFRMKR KDRCYEKKVR YESRKKLAEQ RPRIKGQFVR QVQSTQAP

Arabidopsis Description

APRR5Two-component response regulator-like APRR5 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA42]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.