Factsheet for AT2G46790.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G46670.1	Thale cress	nucleus	38.25	97.81
CDY41558	Canola	nucleus	67.31	76.46
Bra004507.1-P	Field mustard	nucleus	65.81	74.76
CDY48015	Canola	nucleus	73.29	74.4
CDX80047	Canola	nucleus	60.68	71.54
CDY27522	Canola	nucleus	74.79	40.65
Bra040484.1-P	Field mustard	cytosol	70.09	39.81
AT5G24470.1	Thale cress	cytosol, nucleus, plastid	38.25	32.08
AT5G60100.2	Thale cress	nucleus	32.69	29.31
HORVU5Hr1G081620.4	Barley	nucleus	37.82	28.69
TraesCS5A01G320300.1	Wheat	nucleus	36.97	28.5
TraesCS5B01G320500.1	Wheat	nucleus	36.75	28.29
Os09t0532400-01	Rice	nucleus	37.18	27.93
EER99234	Sorghum	nucleus	36.75	27.3
Zm00001d006212_P002	Maize	nucleus	36.54	27.06
GSMUA_Achr9P24280_001	Banana	nucleus	37.18	26.05
GSMUA_Achr4P04970_001	Banana	nucleus	35.26	25.31
TraesCS5D01G326200.3	Wheat	nucleus	33.55	25.2
Zm00001d021291_P002	Maize	mitochondrion, plastid	35.47	24.45
GSMUA_Achr4P05170_001	Banana	nucleus	35.9	21.96
AT5G02810.1	Thale cress	nucleus	32.27	20.77
Zm00001d016258_P001	Maize	cytosol	8.33	18.84
AT5G61380.1	Thale cress	nucleus	22.86	17.31

Protein Annotations

MapMan:27.1.4	Gene3D:3.40.50.2300	EntrezGene:819292	ProteinID:AAC33497.2	EMBL:AB046953	ProteinID:AEC10754.1
EMBL:AF272040	EMBL:AK221652	Symbol:APRR9	ArrayExpress:AT2G46790	EnsemblPlantsGene:AT2G46790	RefSeq:AT2G46790
TAIR:AT2G46790	RefSeq:AT2G46790-TAIR-G	EnsemblPlants:AT2G46790.1	TAIR:AT2G46790.1	EMBL:AY099676	EMBL:AY128856
Unigene:At.1675	InterPro:CCT_domain	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0007623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009987
GO:GO:0010017	GO:GO:0045892	GO:GO:0048511	InterPro:IPR001789	InterPro:IPR010402	RefSeq:NP_001325091.1
RefSeq:NP_001325092.1	RefSeq:NP_566085.1	PFAM:PF00072	PFAM:PF06203	PO:PO:0000293	PFscan:PS50110
PFscan:PS51017	PANTHER:PTHR43874	PANTHER:PTHR43874:SF11	UniProt:Q56XM1	UniProt:Q8L500	SMART:SM00448
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI00000A70C3	SEG:seg	:	:

Description

APRR9Two-component response regulator-like APRR9 [Source:UniProtKB/Swiss-Prot;Acc:Q8L500]

Coordinates

chr2:+:19232607..19235179

Molecular Weight (calculated)

52567.9 Da

IEP (calculated)

7.772

GRAVY (calculated)

-0.741

Length

468 amino acids

Sequence
(BLAST)

001: MGEIVVLSSD DGMETIKNRV KSSEVVQWEK YLPKTVLRVL LVESDYSTRQ IITALLRKCC YKVVAVSDGL AAWEVLKEKS HNIDLILTEL DLPSISGFAL
101: LALVMEHEAC KNIPVIMMSS QDSIKMVLKC MLRGAADYLI KPMRKNELKN LWQHVWRRLT LRDDPTAHAQ SLPASQHNLE DTDETCEDSR YHSDQGSGAQ
201: AINYNGHNKL MENGKSVDER DEFKETFDVT MDLIGGIDKR PDSIYKDKSR DECVGPELGL SLKRSCSVSF ENQDESKHQK LSLSDASAFS RFEESKSAEK
301: AVVALEESTS GEPKTPTESH EKLRKVTSDQ GSATTSSNQE NIGSSSVSFR NQVLQSTVTN QKQDSPIPVE SNREKAASKE VEAGSQSTNE GIAGQSSSTE
401: KPKEEESAKQ RWSRSQREAA LMKFRLKRKD RCFDKKVRYQ SRKKLAEQRP RVKGQFVRTV NSDASTKS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.