Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020263.1-P | Field mustard | nucleus | 28.42 | 42.28 |
| CDY09224 | Canola | nucleus | 28.42 | 40.62 |
| VIT_06s0004g03660.t01 | Wine grape | nucleus | 22.4 | 39.81 |
| AT2G46790.1 | Thale cress | nucleus | 97.81 | 38.25 |
| Solyc03g081270.1.1 | Tomato | plastid | 28.42 | 20.47 |
| AT5G60100.2 | Thale cress | nucleus | 28.42 | 9.96 |
| AT5G24470.1 | Thale cress | cytosol, nucleus, plastid | 27.87 | 9.14 |
| AT5G02810.1 | Thale cress | nucleus | 30.05 | 7.57 |
| AT5G61380.1 | Thale cress | nucleus | 24.04 | 7.12 |
Protein Annotations
| MapMan:35.1 | EntrezGene:819279 | EMBL:AB493594 | ProteinID:AEC10738.1 | ArrayExpress:AT2G46670 | EnsemblPlantsGene:AT2G46670 |
| RefSeq:AT2G46670 | TAIR:AT2G46670 | RefSeq:AT2G46670-TAIR-G | EnsemblPlants:AT2G46670.1 | TAIR:AT2G46670.1 | Unigene:At.65052 |
| UniProt:C0SV91 | InterPro:CCT_domain | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 | InterPro:IPR010402 |
| RefSeq:NP_182190.2 | PFAM:PF06203 | PO:PO:0000293 | PFscan:PS51017 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF11 |
| UniParc:UPI000034EEA5 | SEG:seg | : | : | : | : |
Description
CCT motif family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV91]
Coordinates
chr2:-:19164357..19165233
Molecular Weight (calculated)
20539.8 Da
IEP (calculated)
10.480
GRAVY (calculated)
-1.225
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLTCRFEES KSAEKAVVAL EESTSGEPKT PTESHEKLRK VRSDQGSSTT SSNQENIGSS SVSFRNQVLQ STVTNQKQDS PIPVESNREK AASKEVEAGS
101: QSTNEGIAGQ SSSTEKPKEE ESAKQRWSRS QREAALMKFR LKRKDRCFDK KVRYQSRKKL AEQRPRVKGQ FVRTVNSDAS TKS
101: QSTNEGIAGQ SSSTEKPKEE ESAKQRWSRS QREAALMKFR LKRKDRCFDK KVRYQSRKKL AEQRPRVKGQ FVRTVNSDAS TKS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.