Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09224 | Canola | nucleus | 95.12 | 91.41 |
| VIT_06s0004g03660.t01 | Wine grape | nucleus | 30.08 | 35.92 |
| AT2G46670.1 | Thale cress | nucleus | 42.28 | 28.42 |
| Bra002512.1-P | Field mustard | nucleus | 73.17 | 18.59 |
| Solyc03g081270.1.1 | Tomato | plastid | 32.52 | 15.75 |
| Bra004507.1-P | Field mustard | nucleus | 42.28 | 12.62 |
| Bra028861.1-P | Field mustard | nucleus | 44.72 | 8.62 |
| Bra009565.1-P | Field mustard | nucleus | 45.53 | 7.95 |
| Bra029407.1-P | Field mustard | nucleus | 32.52 | 7.86 |
| Bra036517.1-P | Field mustard | nucleus | 31.71 | 7.85 |
| Bra009768.1-P | Field mustard | nucleus | 35.77 | 7.82 |
| Bra035933.1-P | Field mustard | nucleus | 27.64 | 6.68 |
| Bra012964.1-P | Field mustard | nucleus | 27.64 | 5.9 |
| Bra040484.1-P | Field mustard | cytosol | 25.2 | 3.76 |
Protein Annotations
| EnsemblPlants:Bra020263.1 | EnsemblPlants:Bra020263.1-P | EnsemblPlantsGene:Bra020263 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:CCT_domain | InterPro:IPR010402 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF11 | PFAM:PF06203 | PFscan:PS51017 | UniParc:UPI0002543592 | UniProt:M4DUS0 |
| MapMan:35.1 | : | : | : | : | : |
Description
AT5G60100 (E=3e-039) APRR3, PRR3 | APRR3 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator
Coordinates
chrA02:+:5923790..5925310
Molecular Weight (calculated)
13793.4 Da
IEP (calculated)
11.044
GRAVY (calculated)
-1.033
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTLCNNNGV ASANKAPEEN VGSCSPGDSS VAKIMGSGLS SIDNPSNQQS SGSERATQRE AALMKFRLKR KERCFEKKVR YHSRRKLAEQ RPRVKGQFIR
101: KRDDSNQEMS VRRLTTAEST KMV
101: KRDDSNQEMS VRRLTTAEST KMV
001: MYLTCRFEES KSAEKAVVAL EESTSGEPKT PTESHEKLRK VRSDQGSSTT SSNQENIGSS SVSFRNQVLQ STVTNQKQDS PIPVESNREK AASKEVEAGS
101: QSTNEGIAGQ SSSTEKPKEE ESAKQRWSRS QREAALMKFR LKRKDRCFDK KVRYQSRKKL AEQRPRVKGQ FVRTVNSDAS TKS
101: QSTNEGIAGQ SSSTEKPKEE ESAKQRWSRS QREAALMKFR LKRKDRCFDK KVRYQSRKKL AEQRPRVKGQ FVRTVNSDAS TKS
Arabidopsis Description
CCT motif family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.