Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g03660.t01 | Wine grape | nucleus | 16.14 | 39.81 |
| Solyc03g081240.2.1 | Tomato | nucleus | 89.76 | 33.53 |
| Bra020263.1-P | Field mustard | nucleus | 15.75 | 32.52 |
| CDY09224 | Canola | nucleus | 15.75 | 31.25 |
| AT2G46670.1 | Thale cress | nucleus | 20.47 | 28.42 |
| Solyc10g005030.2.1 | Tomato | nucleus | 25.59 | 10.08 |
| Solyc03g115770.2.1 | Tomato | nucleus | 20.87 | 9.6 |
| Solyc06g069690.2.1 | Tomato | nucleus | 18.9 | 9.56 |
| Solyc04g049670.2.1 | Tomato | nucleus | 23.62 | 9.48 |
| Solyc10g086000.1.1 | Tomato | nucleus | 17.72 | 6.16 |
Protein Annotations
| Gene3D:3.40.50.200 | MapMan:35.1 | InterPro:CCT_domain | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR010402 |
| InterPro:IPR036852 | UniProt:K4BI04 | PFAM:PF00082 | PFAM:PF06203 | PFscan:PS51017 | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF4 | InterPro:Peptidase_S8/S53_dom | InterPro:Peptidase_S8/S53_dom_sf | SUPFAM:SSF52743 | EnsemblPlantsGene:Solyc03g081270.1 | EnsemblPlants:Solyc03g081270.1.1 |
| UniParc:UPI0002768370 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:52158592..52160507
Molecular Weight (calculated)
28024.7 Da
IEP (calculated)
9.601
GRAVY (calculated)
-0.759
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPHISGIV ALLKSLHPHW SPAAIKSALV TTAWQTDPHF RGTNYTLPIS VRGIRFEGPS SAYCSMIAPI LRMPSGISPL QSPGSATPGE SSYQANPFLA
101: LNCESRSSQK FHSQSDQNNS DSSAYNEGKR GHMSEPTTDC ERFPSATDQT INSICCNGDL NHVHLSYGSN GNISLSPGKT PAEYWKEESL HTTDGNSQRS
201: QREAALTKFR MKRKDRCFEK KVRYESRKKL AEQRPRVKGQ FVRHVPSESS PGNS
101: LNCESRSSQK FHSQSDQNNS DSSAYNEGKR GHMSEPTTDC ERFPSATDQT INSICCNGDL NHVHLSYGSN GNISLSPGKT PAEYWKEESL HTTDGNSQRS
201: QREAALTKFR MKRKDRCFEK KVRYESRKKL AEQRPRVKGQ FVRHVPSESS PGNS
001: MDQLRDDPTA HAQSLPASQH NLEDTDETCE DSRYHSDQGS GAQAINYNGH NKLMENGKSV DERDEFKETF DVTMDLIGGI DKRPDSIYKD KSRDECVGPE
101: LGLSLKRSCS VSFENQDESK HQKLSLSDAS AFSRFEESKS AEKAVVALEE STSGEPKTPT ESHEKLRKVT SDQGSATTSS NQENIGSSSV SFRNQVLQST
201: VTNQKQDSPI PVESNREKAA SKEVEAGSQS TNEGIAGQSS STEKPKEEES AKQRWSRSQR EAALMKFRLK RKDRCFDKKV RYQSRKKLAE QRPRVKGQFV
301: RTVNSDASTK S
101: LGLSLKRSCS VSFENQDESK HQKLSLSDAS AFSRFEESKS AEKAVVALEE STSGEPKTPT ESHEKLRKVT SDQGSATTSS NQENIGSSSV SFRNQVLQST
201: VTNQKQDSPI PVESNREKAA SKEVEAGSQS TNEGIAGQSS STEKPKEEES AKQRWSRSQR EAALMKFRLK RKDRCFDKKV RYQSRKKLAE QRPRVKGQFV
301: RTVNSDASTK S
Arabidopsis Description
APRR9Two-component response regulator-like APRR9 [Source:UniProtKB/Swiss-Prot;Acc:Q8L500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.