Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0040g03120.t01 | Wine grape | nucleus | 15.07 | 52.13 |
| KRH32378 | Soybean | nucleus | 46.3 | 44.89 |
| KRH19783 | Soybean | nucleus | 45.48 | 43.97 |
| CDY10422 | Canola | nucleus | 37.53 | 39.09 |
| CDY04868 | Canola | nucleus | 36.99 | 38.96 |
| AT5G02810.1 | Thale cress | nucleus | 38.77 | 38.93 |
| CDY55688 | Canola | nucleus | 36.44 | 38.61 |
| Bra009565.1-P | Field mustard | nucleus | 37.12 | 38.49 |
| CDX70344 | Canola | nucleus | 37.12 | 38.49 |
| Solyc04g049670.2.1 | Tomato | nucleus | 32.05 | 36.97 |
| Bra028861.1-P | Field mustard | nucleus | 31.78 | 36.36 |
| Solyc10g005030.2.1 | Tomato | nucleus | 20.27 | 22.95 |
| Solyc03g081240.2.1 | Tomato | nucleus | 21.37 | 22.94 |
| Solyc06g069690.2.1 | Tomato | nucleus | 14.25 | 20.72 |
| Solyc03g115770.2.1 | Tomato | nucleus | 14.79 | 19.57 |
| Solyc03g081270.1.1 | Tomato | plastid | 6.16 | 17.72 |
Protein Annotations
| MapMan:27.1.4 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | ncoils:Coil | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0010017 | GO:GO:0045892 | InterPro:IPR001789 | UniProt:K4D434 | PFAM:PF00072 | PFscan:PS50110 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF34 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:Solyc10g086000.1 |
| EnsemblPlants:Solyc10g086000.1.1 | UniParc:UPI000276934C | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr10:-:64987759..64997349
Molecular Weight (calculated)
79780.7 Da
IEP (calculated)
7.469
GRAVY (calculated)
-0.615
Length
730 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGSVSMKIV GDEDKKCLDE EKVIGDGIGI SHEGINVVKD NELKINMISN NKIGGREITL QAQRGLKLQE QQYCQVTAVC WQQFLHVTSV KVLLVENDDS
101: TRHVVSALLR NCNYEVIEAA NGLQAWKILE NLTNHIDLVL TEVVMPCLSG LGLLTKIMSH YTRKTVPVIM MSSHDSMDIV FKCLSKGALD FLVKPIRKNE
201: LKNLWQHVWR RCHSSSGSGS ESGTQTQKSI KSKSSEKSEN NSGSNDGEDN GRYGLNVGKG SEDGSGTQNS WTKQAVEAVS SQAVSPLNQV PECPDSTCAQ
301: VVSSKAEIAA YKNAQRNAKR KCQEEEEHPD YIAKKPSLKG IPRNQKLQPE NAIQVPVELV DAEHKTLLAI NSNPSSLKMD EHQESLDGNV PSTEYHDVTA
401: ETAHPRTNSR RLNKAVQLLE INNLSIGESK EPSFQTVKVP EKGAQDDFSV LRRLDLSAFS RYNSSSNPTR TPNGITLGSS IINNGQEIAK KESVCDIPTH
501: TDEKFLHPSS SGTINIIDKG STTNKISEEP LLSREKAEAT STIKGLHSSS AFKPVNIDFR ISHQQVPQVK LKPCNMQATD SLVLRGSLTD IQHPHQHHHH
601: YHFHDVDQDC TSTHVDFSLK KLTAGGPSCA SFNILSRPCE GNPEYHSLNR SASGSNRGSN VQDGSFTAIN AGGTNGESDN GLAGKNESGD ASGIGCGNTT
701: DPSKLAREAA LTKFCQKKKD RCFKKKANGL
101: TRHVVSALLR NCNYEVIEAA NGLQAWKILE NLTNHIDLVL TEVVMPCLSG LGLLTKIMSH YTRKTVPVIM MSSHDSMDIV FKCLSKGALD FLVKPIRKNE
201: LKNLWQHVWR RCHSSSGSGS ESGTQTQKSI KSKSSEKSEN NSGSNDGEDN GRYGLNVGKG SEDGSGTQNS WTKQAVEAVS SQAVSPLNQV PECPDSTCAQ
301: VVSSKAEIAA YKNAQRNAKR KCQEEEEHPD YIAKKPSLKG IPRNQKLQPE NAIQVPVELV DAEHKTLLAI NSNPSSLKMD EHQESLDGNV PSTEYHDVTA
401: ETAHPRTNSR RLNKAVQLLE INNLSIGESK EPSFQTVKVP EKGAQDDFSV LRRLDLSAFS RYNSSSNPTR TPNGITLGSS IINNGQEIAK KESVCDIPTH
501: TDEKFLHPSS SGTINIIDKG STTNKISEEP LLSREKAEAT STIKGLHSSS AFKPVNIDFR ISHQQVPQVK LKPCNMQATD SLVLRGSLTD IQHPHQHHHH
601: YHFHDVDQDC TSTHVDFSLK KLTAGGPSCA SFNILSRPCE GNPEYHSLNR SASGSNRGSN VQDGSFTAIN AGGTNGESDN GLAGKNESGD ASGIGCGNTT
701: DPSKLAREAA LTKFCQKKKD RCFKKKANGL
001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
Arabidopsis Description
APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.