Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04868 | Canola | nucleus | 94.92 | 94.37 |
| Bra028861.1-P | Field mustard | nucleus | 87.23 | 94.2 |
| CDY10422 | Canola | nucleus | 84.62 | 83.17 |
| CDX70344 | Canola | nucleus | 84.18 | 82.39 |
| AT5G02810.1 | Thale cress | nucleus | 86.5 | 81.98 |
| VIT_08s0040g03120.t01 | Wine grape | nucleus | 15.97 | 52.13 |
| KRH32378 | Soybean | nucleus | 50.8 | 46.48 |
| KRH19783 | Soybean | nucleus | 50.8 | 46.36 |
| CDX80201 | Canola | nucleus | 31.2 | 45.65 |
| CDY31578 | Canola | nucleus | 32.08 | 45.01 |
| CDY09224 | Canola | nucleus | 8.27 | 44.53 |
| Solyc10g086000.1.1 | Tomato | nucleus | 38.61 | 36.44 |
| CDY41558 | Canola | nucleus | 21.34 | 35.68 |
| CDY48015 | Canola | nucleus | 21.77 | 32.54 |
| CDX80047 | Canola | nucleus | 18.14 | 31.49 |
| CDY59590 | Canola | nucleus | 21.92 | 31.01 |
| CDY19831 | Canola | nucleus | 21.05 | 29.18 |
| CDY05436 | Canola | nucleus | 21.34 | 29.11 |
| CDX87123 | Canola | nucleus | 21.19 | 28.63 |
| CDX80448 | Canola | nucleus | 22.64 | 28.01 |
| CDX88107 | Canola | plastid | 22.64 | 22.41 |
| CDX87210 | Canola | nucleus | 16.26 | 22.36 |
| CDY02151 | Canola | nucleus | 16.4 | 20.66 |
| CDY64140 | Canola | nucleus | 16.26 | 19.55 |
| CDY27522 | Canola | nucleus | 22.06 | 17.65 |
Protein Annotations
| MapMan:27.1.4 | Gene3D:3.40.50.2300 | GO:A0A078J1F5 | UniProt:A0A078J1F5 | InterPro:CCT_domain | EnsemblPlants:CDY55688 |
| ProteinID:CDY55688 | ProteinID:CDY55688.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00017195001 | InterPro:IPR001789 | InterPro:IPR010402 |
| PFAM:PF00072 | PFAM:PF06203 | PFscan:PS50110 | PFscan:PS51017 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF34 |
| SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0004EC634D | SEG:seg | : |
Description
BnaC02g03470DBnaC02g03470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1F5]
Coordinates
chrLK033421:-:10892..14506
Molecular Weight (calculated)
75277.2 Da
IEP (calculated)
7.511
GRAVY (calculated)
-0.880
Length
689 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGDENGEGY PVTDLKTKER HSGGEDKGNG VPMDARNGPG QGSSPGLQVP LSQQTQATVC WERFLHVRTI RVLLVENDDC TRYIVTALLR NCSYEVVEVA
101: NGVQAWKVLE DLNNHIDIVL TEVVMPYLSG VGLLCKILNH KSRRNIPVIM MSSHDSMGLI FKCLSKGAVD FLVKPIRKNE LKILWQHVWR RCQSSSGSGS
201: ESGTHQTQKS VKSKNIIKSD NDSGHSGENE NGSIGLNASD GSSDGSGAQS SWTKKAVEVD DSPRAVSLWD RVDSTCAQVV HSNPEFPNNH LVAAPAEKET
301: QEQDEKIEDV TMGRDLEISI RRNDDSKDEP LTKTTGILRQ ENSFEKSSSK WKLKVGKGPL DLNSESPSSK QMHEDGGSGF KAMSSHLQDN REPEAPNPHC
401: KTLDTGEAAV KTSEELMDVE HSSKRHRGTK DDGTIVREDR NVLRRSEGSA FSRYNPAANN NKLHDINCQD LTKKTEAACD CHLNMNESLP NNHHSRFGSN
501: NLEMSSTTGA PKVSSAGSST VKHSSIQPLP CDHHHHTSYN PVHIPERKLP PQRGSSNVYN EAIEGNNNAV NYSVNGSGSG SGHGSNDPYG SSNGMNAGGG
601: MNTGSANGAG DGSGSGSGSG NVADENKMSQ REAALTKFRQ KRKERCFRKK VRYQSRKKLA EQRPRVRGQF VRKTADATND NDIKNVEDS
101: NGVQAWKVLE DLNNHIDIVL TEVVMPYLSG VGLLCKILNH KSRRNIPVIM MSSHDSMGLI FKCLSKGAVD FLVKPIRKNE LKILWQHVWR RCQSSSGSGS
201: ESGTHQTQKS VKSKNIIKSD NDSGHSGENE NGSIGLNASD GSSDGSGAQS SWTKKAVEVD DSPRAVSLWD RVDSTCAQVV HSNPEFPNNH LVAAPAEKET
301: QEQDEKIEDV TMGRDLEISI RRNDDSKDEP LTKTTGILRQ ENSFEKSSSK WKLKVGKGPL DLNSESPSSK QMHEDGGSGF KAMSSHLQDN REPEAPNPHC
401: KTLDTGEAAV KTSEELMDVE HSSKRHRGTK DDGTIVREDR NVLRRSEGSA FSRYNPAANN NKLHDINCQD LTKKTEAACD CHLNMNESLP NNHHSRFGSN
501: NLEMSSTTGA PKVSSAGSST VKHSSIQPLP CDHHHHTSYN PVHIPERKLP PQRGSSNVYN EAIEGNNNAV NYSVNGSGSG SGHGSNDPYG SSNGMNAGGG
601: MNTGSANGAG DGSGSGSGSG NVADENKMSQ REAALTKFRQ KRKERCFRKK VRYQSRKKLA EQRPRVRGQF VRKTADATND NDIKNVEDS
001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
Arabidopsis Description
APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.