Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G46790.1 | CDX87210 | AT5G61380.1 | 20407420 |
| AT2G46790.1 | CDY02151 | AT5G61380.1 | 20407420 |
| AT2G46790.1 | CDY64140 | AT5G61380.1 | 20407420 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004507.1-P | Field mustard | nucleus | 93.45 | 90.05 |
| CDY41558 | Canola | nucleus | 90.93 | 87.62 |
| CDY48015 | Canola | nucleus | 72.8 | 62.69 |
| AT2G46790.1 | Thale cress | nucleus | 71.54 | 60.68 |
| CDY27522 | Canola | nucleus | 74.81 | 34.49 |
| CDY59590 | Canola | nucleus | 37.78 | 30.8 |
| CDY19831 | Canola | nucleus | 37.28 | 29.78 |
| CDY05436 | Canola | nucleus | 37.78 | 29.7 |
| CDX87123 | Canola | nucleus | 37.28 | 29.02 |
| CDX80201 | Canola | nucleus | 33.25 | 28.03 |
| CDY31578 | Canola | nucleus | 33.75 | 27.29 |
| CDX80448 | Canola | nucleus | 38.29 | 27.29 |
| CDY09224 | Canola | nucleus | 8.31 | 25.78 |
| Os09t0532400-01 | Rice | nucleus | 37.28 | 23.76 |
| HORVU5Hr1G081620.4 | Barley | nucleus | 36.52 | 23.5 |
| TraesCS5A01G320300.1 | Wheat | nucleus | 35.77 | 23.39 |
| TraesCS5B01G320500.1 | Wheat | nucleus | 35.52 | 23.19 |
| EER99234 | Sorghum | nucleus | 36.52 | 23.02 |
| TraesCS5D01G326200.3 | Wheat | nucleus | 35.77 | 22.79 |
| GSMUA_Achr4P04970_001 | Banana | nucleus | 36.52 | 22.24 |
| Zm00001d006212_P002 | Maize | nucleus | 35.26 | 22.15 |
| GSMUA_Achr9P24280_001 | Banana | nucleus | 37.03 | 22.01 |
| CDX88107 | Canola | plastid | 38.54 | 21.98 |
| Zm00001d021291_P002 | Maize | mitochondrion, plastid | 34.76 | 20.32 |
| GSMUA_Achr4P05170_001 | Banana | nucleus | 37.53 | 19.48 |
| Zm00001d016258_P001 | Maize | cytosol | 10.08 | 19.32 |
| CDY10422 | Canola | nucleus | 32.49 | 18.4 |
| CDX70344 | Canola | nucleus | 32.49 | 18.32 |
| CDY55688 | Canola | nucleus | 31.49 | 18.14 |
| CDY04868 | Canola | nucleus | 31.49 | 18.04 |
| CDX87210 | Canola | nucleus | 20.65 | 16.37 |
| CDY02151 | Canola | nucleus | 20.65 | 14.99 |
| CDY64140 | Canola | nucleus | 21.16 | 14.66 |
Protein Annotations
| EnsemblPlants:CDX80047 | EnsemblPlantsGene:GSBRNA2T00132933001 | Gene3D:3.40.50.2300 | GO:A0A078CTJ0 | GO:GO:0000160 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF11 | PFAM:PF00072 | PFscan:PS50110 | ProteinID:CDX80047 | ProteinID:CDX80047.1 |
| SMART:SM00448 | SUPFAM:SSF52172 | UniParc:UPI0004EF1E15 | MapMan:27.1.4 | : | : |
Description
BnaA05g01090D
Coordinates
chrLK031819:+:1557378..1559279
Molecular Weight (calculated)
44090.3 Da
IEP (calculated)
6.078
GRAVY (calculated)
-0.555
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETMVSRIK SPDVVRWEKY LPKTVLRVLL VESDDSTRQI ITALLQKCSY KVVAVSDGLA AWETLKEKSN EIDLILTELD LPSISGFALL ALVMEHEACK
101: NIPVIMMSSE DSMTMVLKCM LKGAADYLVK PMRKNELKNL WQHVWRRLAL RDGHNGHGLS LPASQQNLED SDETSGDHSD QGSGAQATTS CYGLSVSKLM
201: EDVTMDLIGG IDKRSECFYG DNARDEYVGP ELGLSLKRSC SGSFEKQDQT TKQQKLSLSD ESVGIITLTC RYENSQPAEK GEVGVEPSSS AEPKTPSESH
301: EKLLRCDHGS VTTSSNHENM GSSSISGQNE LSFRNQVGSE STNDVKAKEQ QEESCGLSVE HRRSQREAAL MKFRLKRKDR CFDKKFMRAV MNSNASK
101: NIPVIMMSSE DSMTMVLKCM LKGAADYLVK PMRKNELKNL WQHVWRRLAL RDGHNGHGLS LPASQQNLED SDETSGDHSD QGSGAQATTS CYGLSVSKLM
201: EDVTMDLIGG IDKRSECFYG DNARDEYVGP ELGLSLKRSC SGSFEKQDQT TKQQKLSLSD ESVGIITLTC RYENSQPAEK GEVGVEPSSS AEPKTPSESH
301: EKLLRCDHGS VTTSSNHENM GSSSISGQNE LSFRNQVGSE STNDVKAKEQ QEESCGLSVE HRRSQREAAL MKFRLKRKDR CFDKKFMRAV MNSNASK
001: MGEIVVLSSD DGMETIKNRV KSSEVVQWEK YLPKTVLRVL LVESDYSTRQ IITALLRKCC YKVVAVSDGL AAWEVLKEKS HNIDLILTEL DLPSISGFAL
101: LALVMEHEAC KNIPVIMMSS QDSIKMVLKC MLRGAADYLI KPMRKNELKN LWQHVWRRLT LRDDPTAHAQ SLPASQHNLE DTDETCEDSR YHSDQGSGAQ
201: AINYNGHNKL MENGKSVDER DEFKETFDVT MDLIGGIDKR PDSIYKDKSR DECVGPELGL SLKRSCSVSF ENQDESKHQK LSLSDASAFS RFEESKSAEK
301: AVVALEESTS GEPKTPTESH EKLRKVTSDQ GSATTSSNQE NIGSSSVSFR NQVLQSTVTN QKQDSPIPVE SNREKAASKE VEAGSQSTNE GIAGQSSSTE
401: KPKEEESAKQ RWSRSQREAA LMKFRLKRKD RCFDKKVRYQ SRKKLAEQRP RVKGQFVRTV NSDASTKS
101: LALVMEHEAC KNIPVIMMSS QDSIKMVLKC MLRGAADYLI KPMRKNELKN LWQHVWRRLT LRDDPTAHAQ SLPASQHNLE DTDETCEDSR YHSDQGSGAQ
201: AINYNGHNKL MENGKSVDER DEFKETFDVT MDLIGGIDKR PDSIYKDKSR DECVGPELGL SLKRSCSVSF ENQDESKHQK LSLSDASAFS RFEESKSAEK
301: AVVALEESTS GEPKTPTESH EKLRKVTSDQ GSATTSSNQE NIGSSSVSFR NQVLQSTVTN QKQDSPIPVE SNREKAASKE VEAGSQSTNE GIAGQSSSTE
401: KPKEEESAKQ RWSRSQREAA LMKFRLKRKD RCFDKKVRYQ SRKKLAEQRP RVKGQFVRTV NSDASTKS
Arabidopsis Description
APRR9Two-component response regulator-like APRR9 [Source:UniProtKB/Swiss-Prot;Acc:Q8L500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.