Factsheet for Zm00001d021291_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003811_P001
Zm00001d005366_P001
Zm00001d017241_P002
Zm00001d018818_P001
Zm00001d043140_P001
Zm00001d044406_P001
Zm00001d051114_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46790.1	Zm00001d003811_P001	AT5G61380.1	20407420
AT2G46790.1	Zm00001d005366_P001	AT5G61380.1	20407420
AT2G46790.1	Zm00001d017241_P002	AT5G61380.1	20407420
AT2G46790.1	Zm00001d018818_P001	AT5G61380.1	20407420
AT2G46790.1	Zm00001d043140_P001	AT5G61380.1	20407420
AT2G46790.1	Zm00001d044406_P001	AT5G61380.1	20407420
AT2G46790.1	Zm00001d051114_P001	AT5G61380.1	20407420
AT5G24470.1	Zm00001d003811_P001	AT5G61380.1	20407420
AT5G24470.1	Zm00001d005366_P001	AT5G61380.1	20407420
AT5G24470.1	Zm00001d017241_P002	AT5G61380.1	20407420
AT5G24470.1	Zm00001d018818_P001	AT5G61380.1	20407420
AT5G24470.1	Zm00001d043140_P001	AT5G61380.1	20407420
AT5G24470.1	Zm00001d044406_P001	AT5G61380.1	20407420
AT5G24470.1	Zm00001d051114_P001	AT5G61380.1	20407420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99234	Sorghum	nucleus	84.54	91.11
Zm00001d016258_P001	Maize	cytosol	27.39	89.86
Zm00001d006212_P002	Maize	nucleus	81.3	87.34
Os09t0532400-01	Rice	nucleus	67.89	74.0
TraesCS5A01G320300.1	Wheat	nucleus	59.2	66.23
HORVU5Hr1G081620.4	Barley	nucleus	59.5	65.48
TraesCS5B01G320500.1	Wheat	nucleus	58.62	65.46
TraesCS5D01G326200.3	Wheat	nucleus	55.38	60.35
GSMUA_Achr9P24280_001	Banana	nucleus	38.14	38.77
CDY59590	Canola	nucleus	27.54	38.4
Bra004507.1-P	Field mustard	nucleus	22.98	37.86
CDY41558	Canola	nucleus	22.83	37.62
GSMUA_Achr4P04970_001	Banana	nucleus	35.94	37.42
Bra029407.1-P	Field mustard	nucleus	27.54	36.74
CDY05436	Canola	nucleus	27.1	36.44
Bra036517.1-P	Field mustard	nucleus	26.07	35.61
CDY19831	Canola	nucleus	26.07	35.61
AT2G46790.1	Thale cress	nucleus	24.45	35.47
CDX80047	Canola	nucleus	20.32	34.76
CDX87123	Canola	nucleus	26.07	34.71
VIT_15s0048g02540.t01	Wine grape	nucleus	32.25	34.17
AT5G24470.1	Thale cress	cytosol, nucleus, plastid	27.69	33.69
CDX80448	Canola	nucleus	27.54	33.57
Bra009768.1-P	Field mustard	nucleus	27.84	33.57
GSMUA_Achr4P05170_001	Banana	nucleus	37.41	33.2
CDY48015	Canola	nucleus	22.53	33.19
VIT_16s0098g00900.t01	Wine grape	nucleus	33.28	32.85
Solyc03g081240.2.1	Tomato	nucleus	32.4	32.35
KRH64297	Soybean	nucleus	31.81	31.26
KRG97248	Soybean	nucleus	31.37	31.09
KRH68964	Soybean	nucleus	31.52	30.92
KRH53629	Soybean	nucleus	31.22	30.29
KRH47791	Soybean	nucleus	31.37	29.5
PGSC0003DMT400001574	Potato	nucleus	29.6	29.43
KRH06354	Soybean	nucleus	30.19	29.04
PGSC0003DMT400029402	Potato	nucleus	26.66	28.28
CDX88107	Canola	plastid	28.13	27.44
Solyc10g005030.2.1	Tomato	nucleus	25.77	27.13
Zm00001d004875_P002	Maize	nucleus	26.36	25.76
Zm00001d052781_P005	Maize	nucleus	25.33	24.78
Zm00001d047761_P005	Maize	nucleus	26.36	23.37
Zm00001d007240_P001	Maize	nucleus	19.88	22.8
Zm00001d017241_P002	Maize	nucleus	16.64	21.86
Zm00001d051114_P001	Maize	nucleus	16.94	21.06
CDY27522	Canola	nucleus	22.83	18.0
Bra040484.1-P	Field mustard	cytosol	19.73	16.26
Zm00001d003811_P001	Maize	cytosol	7.66	16.15
Zm00001d018818_P001	Maize	cytosol	6.92	15.46
Zm00001d043140_P001	Maize	cytosol	6.92	15.46
Zm00001d044406_P001	Maize	cytosol	6.77	15.13
Zm00001d005366_P001	Maize	cytosol	9.28	11.62

Protein Annotations

EntrezGene:100273598	MapMan:27.1.4	Gene3D:3.40.50.12740	UniProt:A0A1D6I9R1	InterPro:CCT_domain	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
InterPro:IPR001789	InterPro:IPR010402	ProteinID:ONM56743.1	PFAM:PF00072	PFAM:PF06203	PFscan:PS50110
PFscan:PS51017	PANTHER:PTHR43874	PANTHER:PTHR43874:SF11	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver
UniParc:UPI0008438118	EnsemblPlantsGene:Zm00001d021291	EnsemblPlants:Zm00001d021291_P002	EnsemblPlants:Zm00001d021291_T002	SEG:seg	:

Description

Two-component response regulator-like APRR9

Coordinates

chr7:-:148065548..148071232

Molecular Weight (calculated)

75392.5 Da

IEP (calculated)

6.422

GRAVY (calculated)

-0.727

Length

679 amino acids

Sequence
(BLAST)

001: MYIGRGASAL SFSHKLRFLP TASFQVATAR VREEGEKRLS ESTPARGAEV GMGGGLDEAV KVVDLEDGEG EEEAEAAAAE GSSMEMGMLP RMPVRVLLAE
101: GDDSTRHVIS ALLRKCGYRV AAASDGVKAW DLLKEKSFNV DLVLTEVELP LMSGFLLLST IMEHDASKNI PVIMMSSHDS VSMVFKCMLK GAADFLVKPI
201: RKNELRNLWQ HVWRKQLANG GPNVQHIQRE ENLAERIQQK TGVTKSDNLD RDVPCKNREC SEQESDAQSS CTRSELEAES KQTDNILEYK QSTQRHLSIP
301: SHKNVELNGQ TKIQTEGNNL IPAREDDLSP KKRTCLNENN SERASRDMEL VHIMENQQKY NTQWEVDTMR TTSRGNDEKG SIPAHQLELS LRRTDYGKLE
401: NHEKNDRRTL NHSTSSAFSL YNCRAVPTLG NAGDGQLCST SETLVDVENK NGDSADPSQD MTETNRPPIR VVPVPVQGLT FDGQPFWNGT PVASLFYSQS
501: TPPIWNSKTS MWQESTPQAT SLPQKSPQNE PNEMGAKPVI NAGEQFAMGP PSASGKQLHV EILNDDPRHI SPMTGESGIS TVLDSTRNTL SSSGCDSISN
601: QITAPTESSN VYKDVPETPS AEGSRHLSQR EAALNKFRLK RKDRCFEKKV RYQSRKLLAE QRPRVKGQFV RQDHSIQGS

Best Arabidopsis Sequence Match ( AT5G24470.1 )
(BLAST)

001: MTSSEEVVEV TVVKAPEAGG GKLSRRKIRK KDAGVDGLVK WERFLPKIAL RVLLVEADDS TRQIIAALLR KCSYRVAAVP DGLKAWEMLK GKPESVDLIL
101: TEVDLPSISG YALLTLIMEH DICKNIPVIM MSTQDSVNTV YKCMLKGAAD YLVKPLRRNE LRNLWQHVWR RQTSLAPDSF PWNESVGQQK AEGASANNSN
201: GKRDDHVVSG NGGDAQSSCT RPEMEGESAD VEVSARDAVQ MECAKSQFNE TRLLANELQS KQAEAIDFMG ASFRRTGRRN REESVAQYES RIELDLSLRR
301: PNASENQSSG DRPSLHPSSA SAFTRYVHRP LQTQCSASPV VTDQRKNVAA SQDDNIVLMN QYNTSEPPPN APRRNDTSFY TGADSPGPPF SNQLNSWPGQ
401: SSYPTPTPIN NIQFRDPNTA YTSAMAPASL SPSPSSVSPH EYSSMFHPFN SKPEGLQDRD CSMDVDERRY VSSATEHSAI GNHIDQLIEK KNEDGYSLSV
501: GKIQQSLQRE AALTKFRMKR KDRCYEKKVR YESRKKLAEQ RPRIKGQFVR QVQSTQAP

Arabidopsis Description

APRR5Two-component response regulator-like APRR5 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA42]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.