Factsheet for Zm00001d003811_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d006212_P002
Zm00001d007445_P001
Zm00001d008205_P001
Zm00001d009215_P001
Zm00001d012238_P003
Zm00001d014058_P002
Zm00001d016258_P001
Zm00001d021291_P002
Zm00001d022141_P007
Zm00001d024783_P001
Zm00001d032739_P001
Zm00001d040536_P005
Zm00001d042042_P001
Zm00001d042396_P003
Zm00001d042641_P001
Zm00001d053091_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61380.1	Zm00001d012238_P003	AT1G33470.1	21798944
AT5G61380.1	Zm00001d042042_P001	AT1G33470.1	21798944
AT5G61380.1	Zm00001d042641_P001	AT1G33470.1	21798944
AT5G61380.1	Zm00001d007445_P001	AT1G68050.1	14654842
AT5G61380.1	Zm00001d053091_P001	AT1G68050.1	14654842
AT5G61380.1	Zm00001d014058_P002	AT2G33410.1	21798944
AT5G61380.1	Zm00001d032739_P001	AT2G33410.1	21798944
AT5G61380.1	Zm00001d008205_P001	AT2G46970.1	11828029
AT5G61380.1	Zm00001d024783_P001	AT2G46970.1	11828029
AT5G61380.1	Zm00001d040536_P005	AT2G46970.1	11828029
AT5G61380.1	Zm00001d009215_P001	AT3G16980.1	21798944
AT5G61380.1	Zm00001d022141_P007	AT3G16980.1	21798944
AT5G61380.1	Zm00001d042396_P003	AT3G24650.1	10743655
AT5G61380.1	Zm00001d006212_P002	AT5G24470.1	20407420
AT5G61380.1	Zm00001d016258_P001	AT5G24470.1	20407420
AT5G61380.1	Zm00001d021291_P002	AT5G24470.1	20407420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018818_P001	Maize	cytosol	93.79	99.34
Zm00001d043140_P001	Maize	cytosol	93.48	99.01
Zm00001d044406_P001	Maize	cytosol	92.55	98.03
Zm00001d005366_P001	Maize	cytosol	90.99	54.06
Zm00001d051114_P001	Maize	nucleus	91.3	53.85
Zm00001d017241_P002	Maize	nucleus	85.09	53.0
EES05438	Sorghum	nucleus	84.47	51.91
Os02t0618200-01	Rice	nucleus	73.91	45.95
HORVU6Hr1G057630.1	Barley	nucleus	66.46	41.0
TraesCS6B01G253900.1	Wheat	nucleus	65.53	40.89
TraesCS6A01G227900.2	Wheat	endoplasmic reticulum, plasma membrane, plastid	66.46	38.08
TraesCS6D01G207100.2	Wheat	endoplasmic reticulum, nucleus, plastid	65.84	37.46
GSMUA_Achr2P04570_001	Banana	nucleus	42.55	24.95
KRH54582	Soybean	nucleus	41.93	24.19
GSMUA_Achr10P...	Banana	nucleus	40.37	23.99
KRH63298	Soybean	nucleus	41.3	23.75
GSMUA_Achr9P19550_001	Banana	nucleus	38.51	23.53
KRH56889	Soybean	nucleus	40.68	22.78
KRH03510	Soybean	nucleus	40.37	22.45
VIT_17s0000g06570.t01	Wine grape	nucleus	38.2	22.32
Solyc06g069690.2.1	Tomato	nucleus	33.23	21.31
Bra035933.1-P	Field mustard	nucleus	33.23	21.02
CDX87210	Canola	nucleus	32.61	20.96
VIT_17s0000g06520.t01	Wine grape	cytosol	10.25	20.75
Solyc03g115770.2.1	Tomato	nucleus	35.4	20.65
PGSC0003DMT400050252	Potato	nucleus	35.09	20.51
PGSC0003DMT400083086	Potato	nucleus	34.78	20.4
CDY02151	Canola	nucleus	33.54	19.74
AT5G61380.1	Thale cress	nucleus	36.34	18.93
CDY64140	Canola	nucleus	33.54	18.85
Bra012964.1-P	Field mustard	nucleus	33.54	18.75
Zm00001d016258_P001	Maize	cytosol	9.63	14.98
Zm00001d007240_P001	Maize	nucleus	19.57	10.64
VIT_17s0000g06560.t01	Wine grape	plastid	3.73	8.63
Zm00001d047761_P005	Maize	nucleus	20.19	8.49
Zm00001d052781_P005	Maize	nucleus	18.01	8.36
Zm00001d004875_P002	Maize	nucleus	18.01	8.35
Zm00001d006212_P002	Maize	nucleus	16.15	8.23
Zm00001d021291_P002	Maize	mitochondrion, plastid	16.15	7.66

Protein Annotations

MapMan:27.1.3	Gene3D:3.40.50.12740	UniProt:A0A1D6EBP4	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
InterPro:IPR001789	ProteinID:ONM17758.1	PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF1
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0008456D8A	EnsemblPlantsGene:Zm00001d003811	EnsemblPlants:Zm00001d003811_P001	EnsemblPlants:Zm00001d003811_T001

Description

Two-component response regulator-like APRR1

Coordinates

chr2:+:60524040..60525732

Molecular Weight (calculated)

36316.3 Da

IEP (calculated)

5.610

GRAVY (calculated)

-0.680

Length

322 amino acids

Sequence
(BLAST)

001: MLKYIARNQD LRHIPIIMMS NRDEVSVVVK CLRLGAAEYL VKPLRTNELL NLWTHVWRRR RMLGLPEKNF FNDNFELVLS EPSDANTNST TLLSDETDDR
101: PKGNTNQETG TSKQLEYESN PSVAEPDQRE KMEGVPGSAL DASQKSSPRR AFSRPIKTNL RVAESSAFLA YVKSSTPATS SFDSELQRGG SRLDSLDNQG
201: NCSSATDRSD TGTDVNIRNK EAFEMPAQYP MVWFSSSNMH MERSSEGHND TLGTPPAYHF PFYYPGMVEH NMALSSAQDF QANINNAQAH TPQEGTFKIC
301: HYAGELFYMQ HDSGPDWLIF IP

Best Arabidopsis Sequence Match ( AT5G61380.1 )
(BLAST)

001: MDLNGECKGG DGFIDRSRVR ILLCDNDSTS LGEVFTLLSE CSYQVTAVKS ARQVIDALNA EGPDIDIILA EIDLPMAKGM KMLRYITRDK DLRRIPVIMM
101: SRQDEVPVVV KCLKLGAADY LVKPLRTNEL LNLWTHMWRR RRMLGLAEKN MLSYDFDLVG SDQSDPNTNS TNLFSDDTDD RSLRSTNPQR GNLSHQENEW
201: SVATAPVHAR DGGLGADGTA TSSLAVTAIE PPLDHLAGSH HEPMKRNSNP AQFSSAPKKS RLKIGESSAF FTYVKSTVLR TNGQDPPLVD GNGSLHLHRG
301: LAEKFQVVAS EGINNTKQAR RATPKSTVLR TNGQDPPLVN GNGSHHLHRG AAEKFQVVAS EGINNTKQAH RSRGTEQYHS QGETLQNGAS YPHSLERSRT
401: LPTSMESHGR NYQEGNMNIP QVAMNRSKDS SQVDGSGFSA PNAYPYYMHG VMNQVMMQSA AMMPQYGHQI PHCQPNHPNG MTGYPYYHHP MNTSLQHSQM
501: SLQNGQMSMV HHSWSPAGNP PSNEVRVNKL DRREEALLKF RRKRNQRCFD KKIRYVNRKR LAERRPRVKG QFVRKMNGVN VDLNGQPDSA DYDDEEEEEE
601: EEEEENRDSS PQDDALGT

Arabidopsis Description

APRR1Two-component response regulator-like APRR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.