Factsheet for Zm00001d051114_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d006212_P002
Zm00001d007445_P001
Zm00001d008205_P001
Zm00001d009215_P001
Zm00001d012238_P003
Zm00001d014058_P002
Zm00001d016258_P001
Zm00001d021291_P002
Zm00001d022141_P007
Zm00001d024783_P001
Zm00001d032739_P001
Zm00001d040536_P005
Zm00001d042042_P001
Zm00001d042396_P003
Zm00001d042641_P001
Zm00001d053091_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61380.1	Zm00001d012238_P003	AT1G33470.1	21798944
AT5G61380.1	Zm00001d042042_P001	AT1G33470.1	21798944
AT5G61380.1	Zm00001d042641_P001	AT1G33470.1	21798944
AT5G61380.1	Zm00001d007445_P001	AT1G68050.1	14654842
AT5G61380.1	Zm00001d053091_P001	AT1G68050.1	14654842
AT5G61380.1	Zm00001d014058_P002	AT2G33410.1	21798944
AT5G61380.1	Zm00001d032739_P001	AT2G33410.1	21798944
AT5G61380.1	Zm00001d008205_P001	AT2G46970.1	11828029
AT5G61380.1	Zm00001d024783_P001	AT2G46970.1	11828029
AT5G61380.1	Zm00001d040536_P005	AT2G46970.1	11828029
AT5G61380.1	Zm00001d009215_P001	AT3G16980.1	21798944
AT5G61380.1	Zm00001d022141_P007	AT3G16980.1	21798944
AT5G61380.1	Zm00001d042396_P003	AT3G24650.1	10743655
AT5G61380.1	Zm00001d006212_P002	AT5G24470.1	20407420
AT5G61380.1	Zm00001d016258_P001	AT5G24470.1	20407420
AT5G61380.1	Zm00001d021291_P002	AT5G24470.1	20407420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018818_P001	Maize	cytosol	51.1	91.78
Zm00001d043140_P001	Maize	cytosol	51.1	91.78
Zm00001d003811_P001	Maize	cytosol	53.85	91.3
Zm00001d044406_P001	Maize	cytosol	50.0	89.8
EES05438	Sorghum	nucleus	84.98	88.55
Zm00001d017241_P002	Maize	nucleus	83.33	88.01
Os02t0618200-01	Rice	nucleus	75.27	79.34
TraesCS6B01G253900.1	Wheat	nucleus	68.86	72.87
HORVU6Hr1G057630.1	Barley	nucleus	68.86	72.03
TraesCS6A01G227900.2	Wheat	endoplasmic reticulum, plasma membrane, plastid	69.41	67.44
TraesCS6D01G207100.2	Wheat	endoplasmic reticulum, nucleus, plastid	68.86	66.43
Zm00001d005366_P001	Maize	cytosol	56.78	57.2
GSMUA_Achr10P...	Banana	nucleus	45.05	45.39
GSMUA_Achr2P04570_001	Banana	nucleus	45.05	44.81
VIT_17s0000g06520.t01	Wine grape	cytosol	13.0	44.65
GSMUA_Achr9P19550_001	Banana	nucleus	43.04	44.59
KRH54582	Soybean	nucleus	44.69	43.73
KRH63298	Soybean	nucleus	44.51	43.39
Solyc06g069690.2.1	Tomato	nucleus	39.56	43.03
VIT_17s0000g06570.t01	Wine grape	nucleus	41.94	41.56
KRH56889	Soybean	nucleus	43.41	41.22
PGSC0003DMT400083086	Potato	nucleus	40.84	40.62
Solyc03g115770.2.1	Tomato	nucleus	41.03	40.58
CDX87210	Canola	nucleus	37.0	40.32
PGSC0003DMT400050252	Potato	nucleus	40.48	40.11
KRH03510	Soybean	nucleus	42.49	40.07
Bra035933.1-P	Field mustard	nucleus	36.81	39.49
CDY02151	Canola	nucleus	38.28	38.21
CDY64140	Canola	nucleus	38.1	36.3
Bra012964.1-P	Field mustard	nucleus	38.1	36.11
VIT_17s0000g06560.t01	Wine grape	plastid	8.97	35.25
AT5G61380.1	Thale cress	nucleus	39.74	35.11
Zm00001d006212_P002	Maize	nucleus	21.43	18.51
Zm00001d021291_P002	Maize	mitochondrion, plastid	21.06	16.94
Zm00001d052781_P005	Maize	nucleus	21.25	16.71
Zm00001d004875_P002	Maize	nucleus	21.06	16.55
Zm00001d047761_P005	Maize	nucleus	22.71	16.19
Zm00001d007240_P001	Maize	nucleus	17.4	16.05
Zm00001d016258_P001	Maize	cytosol	5.68	14.98

Protein Annotations

MapMan:27.1.3	Gene3D:3.40.50.2300	UniProt:A0A1D6Q542	ProteinID:AQK53664.1	InterPro:CCT_domain	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
InterPro:IPR001789	InterPro:IPR010402	PFAM:PF00072	PFAM:PF06203	PFscan:PS50110	PFscan:PS51017
PANTHER:PTHR43874	PANTHER:PTHR43874:SF1	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000844F80F
EnsemblPlantsGene:Zm00001d051114	EnsemblPlants:Zm00001d051114_P001	EnsemblPlants:Zm00001d051114_T001	SEG:seg	:	:

Description

PseudoARR-B transcription factor%3B Two-component response regulator-like PRR1

Coordinates

chr4:+:143867613..143870730

Molecular Weight (calculated)

60867.7 Da

IEP (calculated)

6.886

GRAVY (calculated)

-0.593

Length

546 amino acids

Sequence
(BLAST)

001: MAGGGEGDRV GVGGAQQFVD RSKVRILLCD GDATSSREVL RLLCNCSYHV TCAKSPRQVI NILNYEGGEI DIILAEVDLP VSKCFKMLKY IARNKDLRHI
101: PIIMMSNRDE VSVVVKCLRL GAAEYLVKPL RTNELLNLWT HVWRRRRMLG LPEKNFFNDN FELVLSEPSD ANTNSTTLLS DETDDRPKGN TNQETGTSKQ
201: LEYESNPSVA EPDQREKMEG VPGSALDASK KSSPRRAFSR PIKTNLRVAE SSAFLAYVKP STPATSSFDS ELQRGGSRLD SLDNQGNCSS ATDRSDTGTD
301: VNIRSKEAFE MPAQYPMVWF SSSNMHMERS SEGHNDTSGT PPAYHFPFYY PGMVEHNMAL SSAQDFQANI NNAQAHTPPA MLPQYNVYPQ CHGLPVIPSF
401: QFNPSGMSTH SSHLPTQNVW SSASSTPPVP EETCSRSERR AAALAKFRLK RKERCFDKKV RYVNRKKLAE TRPRVRGQFV RQPTNTDVIS IGDDISEDED
501: DDPSSREDNL LRKTGLLLYI PPIIPYSMCL LDDQGSISGG MGNYVD

Best Arabidopsis Sequence Match ( AT5G61380.1 )
(BLAST)

001: MDLNGECKGG DGFIDRSRVR ILLCDNDSTS LGEVFTLLSE CSYQVTAVKS ARQVIDALNA EGPDIDIILA EIDLPMAKGM KMLRYITRDK DLRRIPVIMM
101: SRQDEVPVVV KCLKLGAADY LVKPLRTNEL LNLWTHMWRR RRMLGLAEKN MLSYDFDLVG SDQSDPNTNS TNLFSDDTDD RSLRSTNPQR GNLSHQENEW
201: SVATAPVHAR DGGLGADGTA TSSLAVTAIE PPLDHLAGSH HEPMKRNSNP AQFSSAPKKS RLKIGESSAF FTYVKSTVLR TNGQDPPLVD GNGSLHLHRG
301: LAEKFQVVAS EGINNTKQAR RATPKSTVLR TNGQDPPLVN GNGSHHLHRG AAEKFQVVAS EGINNTKQAH RSRGTEQYHS QGETLQNGAS YPHSLERSRT
401: LPTSMESHGR NYQEGNMNIP QVAMNRSKDS SQVDGSGFSA PNAYPYYMHG VMNQVMMQSA AMMPQYGHQI PHCQPNHPNG MTGYPYYHHP MNTSLQHSQM
501: SLQNGQMSMV HHSWSPAGNP PSNEVRVNKL DRREEALLKF RRKRNQRCFD KKIRYVNRKR LAERRPRVKG QFVRKMNGVN VDLNGQPDSA DYDDEEEEEE
601: EEEEENRDSS PQDDALGT

Arabidopsis Description

APRR1Two-component response regulator-like APRR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.