Factsheet for Zm00001d005366_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d006212_P002
Zm00001d007445_P001
Zm00001d008205_P001
Zm00001d009215_P001
Zm00001d012238_P003
Zm00001d014058_P002
Zm00001d016258_P001
Zm00001d021291_P002
Zm00001d022141_P007
Zm00001d024783_P001
Zm00001d032739_P001
Zm00001d040536_P005
Zm00001d042042_P001
Zm00001d042396_P003
Zm00001d042641_P001
Zm00001d053091_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61380.1	Zm00001d012238_P003	AT1G33470.1	21798944
AT5G61380.1	Zm00001d042042_P001	AT1G33470.1	21798944
AT5G61380.1	Zm00001d042641_P001	AT1G33470.1	21798944
AT5G61380.1	Zm00001d007445_P001	AT1G68050.1	14654842
AT5G61380.1	Zm00001d053091_P001	AT1G68050.1	14654842
AT5G61380.1	Zm00001d014058_P002	AT2G33410.1	21798944
AT5G61380.1	Zm00001d032739_P001	AT2G33410.1	21798944
AT5G61380.1	Zm00001d008205_P001	AT2G46970.1	11828029
AT5G61380.1	Zm00001d024783_P001	AT2G46970.1	11828029
AT5G61380.1	Zm00001d040536_P005	AT2G46970.1	11828029
AT5G61380.1	Zm00001d009215_P001	AT3G16980.1	21798944
AT5G61380.1	Zm00001d022141_P007	AT3G16980.1	21798944
AT5G61380.1	Zm00001d042396_P003	AT3G24650.1	10743655
AT5G61380.1	Zm00001d006212_P002	AT5G24470.1	20407420
AT5G61380.1	Zm00001d016258_P001	AT5G24470.1	20407420
AT5G61380.1	Zm00001d021291_P002	AT5G24470.1	20407420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018818_P001	Maize	cytosol	54.06	96.38
Zm00001d043140_P001	Maize	cytosol	53.87	96.05
Zm00001d044406_P001	Maize	cytosol	53.32	95.07
Zm00001d003811_P001	Maize	cytosol	54.06	90.99
Zm00001d051114_P001	Maize	nucleus	57.2	56.78
Zm00001d017241_P002	Maize	nucleus	53.69	56.29
EES05438	Sorghum	nucleus	53.14	54.96
Os02t0618200-01	Rice	nucleus	46.86	49.03
TraesCS6B01G253900.1	Wheat	nucleus	41.51	43.6
HORVU6Hr1G057630.1	Barley	nucleus	41.88	43.49
TraesCS6A01G227900.2	Wheat	endoplasmic reticulum, plasma membrane, plastid	41.7	40.21
TraesCS6D01G207100.2	Wheat	endoplasmic reticulum, nucleus, plastid	41.33	39.58
KRH54582	Soybean	nucleus	26.75	25.99
GSMUA_Achr2P04570_001	Banana	nucleus	26.2	25.87
GSMUA_Achr10P...	Banana	nucleus	25.83	25.83
KRH63298	Soybean	nucleus	26.57	25.71
VIT_17s0000g06570.t01	Wine grape	nucleus	25.28	24.86
KRH56889	Soybean	nucleus	26.2	24.7
GSMUA_Achr9P19550_001	Banana	nucleus	23.99	24.67
KRH03510	Soybean	nucleus	26.01	24.35
Solyc03g115770.2.1	Tomato	nucleus	23.06	22.64
PGSC0003DMT400050252	Potato	nucleus	22.88	22.5
CDX87210	Canola	nucleus	20.66	22.36
Solyc06g069690.2.1	Tomato	nucleus	20.66	22.31
Bra035933.1-P	Field mustard	nucleus	20.66	22.0
PGSC0003DMT400083086	Potato	nucleus	21.96	21.68
CDY02151	Canola	nucleus	21.22	21.02
CDY64140	Canola	nucleus	21.4	20.24
AT5G61380.1	Thale cress	nucleus	23.06	20.23
Bra012964.1-P	Field mustard	nucleus	21.22	19.97
Zm00001d016258_P001	Maize	cytosol	5.72	14.98
VIT_17s0000g06520.t01	Wine grape	cytosol	4.06	13.84
Zm00001d007240_P001	Maize	nucleus	13.65	12.5
Zm00001d006212_P002	Maize	nucleus	12.18	10.44
Zm00001d047761_P005	Maize	nucleus	14.58	10.31
Zm00001d052781_P005	Maize	nucleus	12.92	10.09
Zm00001d004875_P002	Maize	nucleus	12.73	9.93
Zm00001d021291_P002	Maize	mitochondrion, plastid	11.62	9.28
VIT_17s0000g06560.t01	Wine grape	plastid	0.37	1.44

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.20.58.1940	Gene3D:1.20.58.530	MapMan:27.1.3	Gene3D:3.40.850.10	UniProt:A0A1D6EM20
InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0007154	GO:GO:0007165
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016459	GO:GO:0016787	InterPro:IPR000048
InterPro:IPR001609	InterPro:IPR001789	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:Myosin_head_motor_dom
ProteinID:ONM20922.1	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PFscan:PS50096	PFscan:PS50110
PFscan:PS51456	PANTHER:PTHR13140	PANTHER:PTHR13140:SF689	SMART:SM00242	SUPFAM:SSF52172	SUPFAM:SSF52540
InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI00084520EF	EnsemblPlantsGene:Zm00001d005366	EnsemblPlants:Zm00001d005366_P001	EnsemblPlants:Zm00001d005366_T001	:

Description

Two-component response regulator-like APRR1

Coordinates

chr2:+:171098470..171101501

Molecular Weight (calculated)

61395.8 Da

IEP (calculated)

9.555

GRAVY (calculated)

-0.612

Length

542 amino acids

Sequence
(BLAST)

001: MSNRDEVSVV VKCLRLGAAE YLVKPLRTNE LLNLWTHVWR RRRMLGLPEK NFFNDNFELV LSEPSDANTN STTLLSDETD DRPKGNTNQE TGTSKQLEYE
101: SNPSVAEPDQ REKMEGVPGS ALDASQKSSP RRAFSRPIKT NLRVAESSAF LAYVKSSTPA TSSFDSELQR GGSRLDSLDN QGNCSSATDR SDTGTDVNIR
201: NKEAFEMPAQ YPMVWFSSSN MHMERSSEGH NDTSGTPPAY HFPFYYPGMV EHNMALSSAQ DFQANINNAQ AHTPQEGTFK ICHYAGEVTY DTAGFLEKNR
301: DPLHSESIQL LSSCKCELPK HFASVMVADS QNKSSLSWHS VMDTQKQSVV TKFKPQLFKL MQQLESTTPH FIRCIQPNSK QLPRYGFLLL RSIASQDPLS
401: VSIAVLQQLN IPPEMYQVGY TKLFFRTGQV AALENAKIQM LHGTLRIQKH FRVIRGERAR IHFDNLVKRW RAAVLIQKYT RRRLAANMFN DQLNHIILLQ
501: SVMRGCLTRR KYKCLQNGKE SKASHNIVPG ETRKNNAESR IS

Best Arabidopsis Sequence Match ( AT1G50360.1 )
(BLAST)

0001: MAHKVKASFQ SLKTMPADYR FLGSPISDHL ETNLITPPNG HLKNGVNGTA SSVGGMDSVN EDSPYSVRSI LNGERSSIGD GDSILPLPES NDRKWSDTNV
0101: YARKKVLQFW VQLPNGNWEL GKIMSTSGEE SVIVVTEGKV LKVKSETLVP ANPDILDGVD DLMQLSYLNE PAVLYNLEYR YNQDMIYTKA GPVLVAVNPF
0201: KEVPLYGNRN IEAYRKRSNE SPHVYAIADT AIREMIRDEV NQSIIISGES GAGKTETAKI AMQYLAALGG GSGIEYEILK TNPILEAFGN AKTLRNDNSS
0301: RFGKLIEIHF SETGKISGAQ IQTFLLEKSR VVQCTEGERS YHIFYQLCAG ASPTLREKLN LTSAKQYNYL KQSNCYSING VDDAERFHAV KEALDIVHVS
0401: KEDQENVFAM LAAVLWLGNV SFTIIDNENH VEPEPDESLS TVAKLIGCNI NELKLALSKR NMRVNNDTIV QKLTLSQAID ARDALAKSIY ACLFDWLVEQ
0501: INKSLAVGKR RTGRSISILD IYGFESFNKN SFEQFCINYA NERLQQHFNR HLFKLEQEEY IQDGIDWTRV DFEDNQECLS LFEKKPLGLL SLLDEESTFP
0601: NGTDLTLANK LKQHLNDNSC FRGDRGKAFT VAHYAGEVTY ETTGFLEKNR DLLHSDSIQL LSSCSCHLPQ AFASSMLIYS EKPLVGPLHK AGGADSQRLS
0701: VATKFKGQLF QLMQRLGNTT PHFIRCIKPN NVQSAGLYEQ GLVLQQLRCC GVLEVVRISR SGFPTRMFHH KFARRYGFLL LENIAAKDPL SVSVAILHQF
0801: NILPEMYQVG YTKLFFRTGQ IGVLEDTRNR TLHGILRLQS YFRGHQARCR LKELKTGITI LQSFVRGEKM RKEYTELLQR HRASAAIQSH VKRRIASQQY
0901: KATVDASAVI QSAIRGELVR RCAGDIGWLS SGGTKRNESD EVLVKASYLS DLQRRVLRTE AALREKEEEN DILRQRVQQY DNRWSEYETK MKSMEEIWQK
1001: QMKSLQSSLS IAKKSLEVED SARNSDASVN ASDATDLDSG GSHYQMGHGR SRSVGVGLSV ISRLAEEFGQ RAQVFGDDRK FLMEVKSGQV EANLNPDREL
1101: RRLKQMFETW KKDYGGRLRE TKLILSKLGS EETGGSAEKV KMNWWGRLRS TRY

Arabidopsis Description

VIII-AMyosin-3 [Source:UniProtKB/Swiss-Prot;Acc:F4I507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.