Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035933.1-P | Field mustard | nucleus | 71.84 | 87.23 |
| CDX87210 | Canola | nucleus | 70.06 | 86.43 |
| CDY02151 | Canola | nucleus | 70.39 | 79.52 |
| Bra012964.1-P | Field mustard | nucleus | 73.3 | 78.65 |
| CDY64140 | Canola | nucleus | 72.82 | 78.53 |
| KRH54582 | Soybean | nucleus | 50.65 | 56.09 |
| VIT_17s0000g06570.t01 | Wine grape | nucleus | 49.68 | 55.72 |
| KRH63298 | Soybean | nucleus | 50.49 | 55.71 |
| KRH56889 | Soybean | nucleus | 50.49 | 54.26 |
| PGSC0003DMT400050252 | Potato | nucleus | 48.22 | 54.08 |
| Solyc03g115770.2.1 | Tomato | nucleus | 48.22 | 53.99 |
| KRH03510 | Soybean | nucleus | 50.16 | 53.54 |
| PGSC0003DMT400083086 | Potato | nucleus | 46.93 | 52.82 |
| Solyc06g069690.2.1 | Tomato | nucleus | 42.23 | 51.99 |
| Os02t0618200-01 | Rice | nucleus | 34.95 | 41.7 |
| TraesCS6B01G253900.1 | Wheat | nucleus | 34.63 | 41.47 |
| EES05438 | Sorghum | nucleus | 35.11 | 41.41 |
| GSMUA_Achr9P19550_001 | Banana | nucleus | 35.28 | 41.37 |
| Zm00001d017241_P002 | Maize | nucleus | 34.47 | 41.2 |
| HORVU6Hr1G057630.1 | Barley | nucleus | 34.63 | 41.0 |
| GSMUA_Achr10P... | Banana | nucleus | 35.6 | 40.59 |
| GSMUA_Achr2P04570_001 | Banana | nucleus | 35.92 | 40.44 |
| Zm00001d051114_P001 | Maize | nucleus | 35.11 | 39.74 |
| TraesCS6A01G227900.2 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 34.79 | 38.26 |
| TraesCS6D01G207100.2 | Wheat | endoplasmic reticulum, nucleus, plastid | 34.79 | 37.99 |
| Zm00001d003811_P001 | Maize | cytosol | 18.93 | 36.34 |
| Zm00001d018818_P001 | Maize | cytosol | 17.31 | 35.2 |
| Zm00001d043140_P001 | Maize | cytosol | 17.31 | 35.2 |
| Zm00001d044406_P001 | Maize | cytosol | 16.83 | 34.21 |
| AT2G46670.1 | Thale cress | nucleus | 7.12 | 24.04 |
| Zm00001d005366_P001 | Maize | cytosol | 20.23 | 23.06 |
| AT2G46790.1 | Thale cress | nucleus | 17.31 | 22.86 |
| AT5G24470.1 | Thale cress | cytosol, nucleus, plastid | 18.28 | 20.25 |
| AT5G60100.2 | Thale cress | nucleus | 16.83 | 19.92 |
| AT5G02810.1 | Thale cress | nucleus | 19.09 | 16.23 |
Protein Annotations
| MapMan:27.1.3 | Gene3D:3.40.50.2300 | EntrezGene:836259 | UniProt:A0A178UC73 | EMBL:AB041530 | ProteinID:AED97460.1 |
| EMBL:AF272039 | EMBL:AJ251086 | ArrayExpress:AT5G61380 | EnsemblPlantsGene:AT5G61380 | RefSeq:AT5G61380 | TAIR:AT5G61380 |
| RefSeq:AT5G61380-TAIR-G | EnsemblPlants:AT5G61380.1 | TAIR:AT5G61380.1 | EMBL:AY094393 | Unigene:At.21919 | ProteinID:BAB08493.1 |
| EMBL:BT005816 | InterPro:CCT_domain | InterPro:CheY-like_superfamily | GO:GO:0000003 | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0007623 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010031 | GO:GO:0010468 |
| GO:GO:0010629 | GO:GO:0048511 | InterPro:IPR001789 | InterPro:IPR010402 | RefSeq:NP_200946.1 | ProteinID:OAO90757.1 |
| PFAM:PF00072 | PFAM:PF06203 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50110 | PFscan:PS51017 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF35 |
| UniProt:Q9LKL2 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | Symbol:TOC1 | UniParc:UPI0000060D52 |
| SEG:seg | : | : | : | : | : |
Description
APRR1Two-component response regulator-like APRR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKL2]
Coordinates
chr5:+:24674963..24678550
Molecular Weight (calculated)
69199.3 Da
IEP (calculated)
7.591
GRAVY (calculated)
-0.818
Length
618 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLNGECKGG DGFIDRSRVR ILLCDNDSTS LGEVFTLLSE CSYQVTAVKS ARQVIDALNA EGPDIDIILA EIDLPMAKGM KMLRYITRDK DLRRIPVIMM
101: SRQDEVPVVV KCLKLGAADY LVKPLRTNEL LNLWTHMWRR RRMLGLAEKN MLSYDFDLVG SDQSDPNTNS TNLFSDDTDD RSLRSTNPQR GNLSHQENEW
201: SVATAPVHAR DGGLGADGTA TSSLAVTAIE PPLDHLAGSH HEPMKRNSNP AQFSSAPKKS RLKIGESSAF FTYVKSTVLR TNGQDPPLVD GNGSLHLHRG
301: LAEKFQVVAS EGINNTKQAR RATPKSTVLR TNGQDPPLVN GNGSHHLHRG AAEKFQVVAS EGINNTKQAH RSRGTEQYHS QGETLQNGAS YPHSLERSRT
401: LPTSMESHGR NYQEGNMNIP QVAMNRSKDS SQVDGSGFSA PNAYPYYMHG VMNQVMMQSA AMMPQYGHQI PHCQPNHPNG MTGYPYYHHP MNTSLQHSQM
501: SLQNGQMSMV HHSWSPAGNP PSNEVRVNKL DRREEALLKF RRKRNQRCFD KKIRYVNRKR LAERRPRVKG QFVRKMNGVN VDLNGQPDSA DYDDEEEEEE
601: EEEEENRDSS PQDDALGT
101: SRQDEVPVVV KCLKLGAADY LVKPLRTNEL LNLWTHMWRR RRMLGLAEKN MLSYDFDLVG SDQSDPNTNS TNLFSDDTDD RSLRSTNPQR GNLSHQENEW
201: SVATAPVHAR DGGLGADGTA TSSLAVTAIE PPLDHLAGSH HEPMKRNSNP AQFSSAPKKS RLKIGESSAF FTYVKSTVLR TNGQDPPLVD GNGSLHLHRG
301: LAEKFQVVAS EGINNTKQAR RATPKSTVLR TNGQDPPLVN GNGSHHLHRG AAEKFQVVAS EGINNTKQAH RSRGTEQYHS QGETLQNGAS YPHSLERSRT
401: LPTSMESHGR NYQEGNMNIP QVAMNRSKDS SQVDGSGFSA PNAYPYYMHG VMNQVMMQSA AMMPQYGHQI PHCQPNHPNG MTGYPYYHHP MNTSLQHSQM
501: SLQNGQMSMV HHSWSPAGNP PSNEVRVNKL DRREEALLKF RRKRNQRCFD KKIRYVNRKR LAERRPRVKG QFVRKMNGVN VDLNGQPDSA DYDDEEEEEE
601: EEEEENRDSS PQDDALGT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.