Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80201 | Canola | nucleus | 72.22 | 80.04 |
| CDY31578 | Canola | nucleus | 73.75 | 78.41 |
| Bra002512.1-P | Field mustard | nucleus | 72.61 | 78.31 |
| OQU81435 | Sorghum | mitochondrion | 23.75 | 42.61 |
| TraesCSU01G199500.3 | Wheat | nucleus | 29.69 | 35.07 |
| AT2G46790.1 | Thale cress | nucleus | 29.31 | 32.69 |
| TraesCSU01G221500.1 | Wheat | nucleus | 27.59 | 32.65 |
| GSMUA_Achr8P01990_001 | Banana | cytosol, nucleus, plastid | 45.79 | 32.3 |
| VIT_13s0067g03390.t01 | Wine grape | nucleus | 45.79 | 31.08 |
| AT5G02810.1 | Thale cress | nucleus | 42.91 | 30.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.83 | 30.55 |
| GSMUA_Achr9P04240_001 | Banana | nucleus | 44.64 | 29.61 |
| Solyc04g049670.2.1 | Tomato | nucleus | 34.67 | 28.59 |
| TraesCS2D01G079600.2 | Wheat | nucleus | 36.78 | 28.53 |
| TraesCS4B01G198700.1 | Wheat | nucleus | 41.38 | 28.5 |
| TraesCS2A01G081900.2 | Wheat | nucleus | 36.97 | 28.47 |
| AT2G46670.1 | Thale cress | nucleus | 9.96 | 28.42 |
| TraesCS4A01G105300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 36.02 | 28.23 |
| Os07t0695100-01 | Rice | nucleus | 40.04 | 28.17 |
| TraesCSU01G196100.2 | Wheat | nucleus | 36.4 | 28.07 |
| EER92434 | Sorghum | nucleus | 41.0 | 27.97 |
| HORVU4Hr1G057550.2 | Barley | nucleus | 40.42 | 27.8 |
| TraesCS4D01G199600.1 | Wheat | nucleus | 40.61 | 27.79 |
| Zm00001d047761_P005 | Maize | nucleus | 40.42 | 27.55 |
| Os03t0284100-01 | Rice | nucleus | 39.27 | 27.52 |
| HORVU2Hr1G013400.34 | Barley | cytosol, nucleus, plastid | 36.4 | 27.5 |
| Zm00001d007240_P001 | Maize | nucleus | 30.65 | 27.03 |
| AT5G24470.1 | Thale cress | cytosol, nucleus, plastid | 27.78 | 25.99 |
| AT5G61380.1 | Thale cress | nucleus | 19.92 | 16.83 |
Protein Annotations
| MapMan:27.1.4 | Gene3D:3.40.50.2300 | EntrezGene:836132 | ProteinID:AED97278.1 | Symbol:APRR3 | ArrayExpress:AT5G60100 |
| EnsemblPlantsGene:AT5G60100 | RefSeq:AT5G60100 | TAIR:AT5G60100 | RefSeq:AT5G60100-TAIR-G | EnsemblPlants:AT5G60100.2 | TAIR:AT5G60100.2 |
| Unigene:At.1676 | InterPro:CCT_domain | InterPro:CheY-like_superfamily | UniProt:F4JXG7 | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0032091 | GO:GO:0042752 | InterPro:IPR001789 | InterPro:IPR010402 |
| RefSeq:NP_001190575.1 | PFAM:PF00072 | PFAM:PF06203 | PO:PO:0000013 | PO:PO:0000035 | PO:PO:0000036 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | Symbol:PRR3 |
| PFscan:PS50110 | PFscan:PS51017 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF34 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0001E93097 | SEG:seg | : | : | : |
Description
PRR3Pseudo-response regulator 3 [Source:UniProtKB/TrEMBL;Acc:F4JXG7]
Coordinates
chr5:-:24197998..24201364
Molecular Weight (calculated)
58602.6 Da
IEP (calculated)
8.167
GRAVY (calculated)
-0.843
Length
522 amino acids
Sequence
(BLAST)
(BLAST)
001: MCFNNIETGD EVETERQVFG SSEEDEFRVE DTARNTNNVQ ISQQQQQPLA HVVKWERYLP VRSLKVLLVE NDDSTRHIVT ALLKNCSYEV TAVPDVLEAW
101: RILEDEKSCI DLVLTEVDMP VHSGTGLLSK IMSHKTLKNI PVIMMSSHDS MVLVFKCLSN GAVDFLVKPI RKNELKNLWQ HVWRRCHSVR VLIWLPVLQK
201: LLCVFFLLMR LLIYQSSGSG SESGIHDKKS VKPESTQGSE NDASISDEHR NESGSSGGLS NQDGGSDNGS GTQSSWTKRA SDTKSTSPSN QFPDAPNKKG
301: TYENGCAHVN RLKEAEDQKE QIGTGSQTGM SMSKKAEEPG DLEKNAKYSV QALERNNDDT LNRSSGNSQV ESKAPSSNRE DLQSLEQTLK KTREDRDYKV
401: GDRSVLRHSN LSAFSKYNNG ATSAKKAPEE NVESCSPHDS PIAKLLGSSS SSDNPLKQQS SGSDRWAQRE AALMKFRLKR KERCFEKKVR YHSRKKLAEQ
501: RPHVKGQFIR KRDDHKSGSE DN
101: RILEDEKSCI DLVLTEVDMP VHSGTGLLSK IMSHKTLKNI PVIMMSSHDS MVLVFKCLSN GAVDFLVKPI RKNELKNLWQ HVWRRCHSVR VLIWLPVLQK
201: LLCVFFLLMR LLIYQSSGSG SESGIHDKKS VKPESTQGSE NDASISDEHR NESGSSGGLS NQDGGSDNGS GTQSSWTKRA SDTKSTSPSN QFPDAPNKKG
301: TYENGCAHVN RLKEAEDQKE QIGTGSQTGM SMSKKAEEPG DLEKNAKYSV QALERNNDDT LNRSSGNSQV ESKAPSSNRE DLQSLEQTLK KTREDRDYKV
401: GDRSVLRHSN LSAFSKYNNG ATSAKKAPEE NVESCSPHDS PIAKLLGSSS SSDNPLKQQS SGSDRWAQRE AALMKFRLKR KERCFEKKVR YHSRKKLAEQ
501: RPHVKGQFIR KRDDHKSGSE DN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.