Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G105300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 83.38 | 94.89 |
| TraesCS4D01G199600.1 | Wheat | nucleus | 94.33 | 93.71 |
| HORVU4Hr1G057550.2 | Barley | nucleus | 93.4 | 93.28 |
| EER92434 | Sorghum | nucleus | 69.39 | 68.76 |
| Os03t0284100-01 | Rice | nucleus | 67.55 | 68.72 |
| Zm00001d047761_P005 | Maize | nucleus | 68.73 | 68.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.89 | 47.39 |
| GSMUA_Achr8P01990_001 | Banana | cytosol, nucleus, plastid | 45.78 | 46.89 |
| CDX80201 | Canola | nucleus | 27.97 | 45.01 |
| GSMUA_Achr9P04240_001 | Banana | nucleus | 45.78 | 44.09 |
| VIT_13s0067g03390.t01 | Wine grape | nucleus | 44.46 | 43.82 |
| Bra002512.1-P | Field mustard | nucleus | 27.84 | 43.59 |
| CDY31578 | Canola | nucleus | 28.1 | 43.38 |
| Solyc04g049670.2.1 | Tomato | nucleus | 34.96 | 41.86 |
| AT5G60100.2 | Thale cress | nucleus | 28.5 | 41.38 |
| TraesCS5B01G320500.1 | Wheat | nucleus | 23.88 | 29.77 |
| TraesCS4B01G115100.1 | Wheat | nucleus | 24.27 | 26.59 |
| TraesCS6B01G253900.1 | Wheat | nucleus | 15.57 | 22.87 |
Protein Annotations
| MapMan:27.1.4 | Gene3D:3.40.50.2300 | InterPro:CCT_domain | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:IPR001789 | InterPro:IPR010402 | PFAM:PF00072 | PFAM:PF06203 | PFscan:PS50110 | PFscan:PS51017 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF12 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:TraesCS4B01G198700 |
| EnsemblPlants:TraesCS4B01G198700.1 | TIGR:cd00156 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4B:+:427491684..427496233
Molecular Weight (calculated)
82255.7 Da
IEP (calculated)
6.950
GRAVY (calculated)
-0.884
Length
758 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSAGQAGAD GPSTSDIRGT GNGAVENGHA LKANEDKEWR GGSKEEDWPS THSAPPGLDE HKQQQGRVIR WEKFLPVETL RVLLVENDDC TRHVVRALLR
101: KCGYEVIAAE NGLHAWHYLE DVQNRIDLVL TEVAMPCLSG IGLLSKITSH SICKGIPVIM MSKNDSMSTV FKCLSKGAVD FLVKPIRKNE LKTLWQHIWR
201: RCHSSSGSES GIHTQKCSKP KAGDEYENNS GGSHDDDDDD DDDADDDFSV GPNARDGSDN GSGTQSSWTK RAVEIDSPQL VSSDHLADSP DSTCAQVIHP
301: RSEIGSNRWL PTANKRNINN QKENNDDSMG KYLEIGAPRN SSLGHQSSPN QMSVNPTEKQ HENLISQNKS VNKIVIDEPT SQTADLISSI ARNTESKQAA
401: RITDAPDCSS KMAHGTEMKN DSPINMPSQE LGLKISETAR CGTEIHDERS ILKRSNLSAF TRYHTPMASD QGGATFRGSC SPQDNSSEAV KTNSTCKMES
501: NSDAAQIKQG SNGSSNNNDM GSSTKNAIAK PCTDRERVMS PSLVKSNQQT SAFHPVQHQV SPADAARKDK ASEEIVNAVK VGHSSEAQQS SVQHHHHAHY
601: YRHVIAQQQT LIDRASNARC GSSNASDLPL EGHAANYGVN GSISGSNNGS NTQNASSSAP NIARPNMDSG AMDKTEAGGG TGSGSGPSGS GNDMVCQNQL
701: SQREAAVNKF RQKRKERNFG KKVRYQSRKR LAEQRPRVRG QFVRQSGQED EAGQAEDR
101: KCGYEVIAAE NGLHAWHYLE DVQNRIDLVL TEVAMPCLSG IGLLSKITSH SICKGIPVIM MSKNDSMSTV FKCLSKGAVD FLVKPIRKNE LKTLWQHIWR
201: RCHSSSGSES GIHTQKCSKP KAGDEYENNS GGSHDDDDDD DDDADDDFSV GPNARDGSDN GSGTQSSWTK RAVEIDSPQL VSSDHLADSP DSTCAQVIHP
301: RSEIGSNRWL PTANKRNINN QKENNDDSMG KYLEIGAPRN SSLGHQSSPN QMSVNPTEKQ HENLISQNKS VNKIVIDEPT SQTADLISSI ARNTESKQAA
401: RITDAPDCSS KMAHGTEMKN DSPINMPSQE LGLKISETAR CGTEIHDERS ILKRSNLSAF TRYHTPMASD QGGATFRGSC SPQDNSSEAV KTNSTCKMES
501: NSDAAQIKQG SNGSSNNNDM GSSTKNAIAK PCTDRERVMS PSLVKSNQQT SAFHPVQHQV SPADAARKDK ASEEIVNAVK VGHSSEAQQS SVQHHHHAHY
601: YRHVIAQQQT LIDRASNARC GSSNASDLPL EGHAANYGVN GSISGSNNGS NTQNASSSAP NIARPNMDSG AMDKTEAGGG TGSGSGPSGS GNDMVCQNQL
701: SQREAAVNKF RQKRKERNFG KKVRYQSRKR LAEQRPRVRG QFVRQSGQED EAGQAEDR
001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
Arabidopsis Description
APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.