Factsheet for GSMUA_Achr8P01990_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	73.24	70.76
GSMUA_Achr9P04240_001	Banana	nucleus	68.38	64.29
OQU81435	Sorghum	mitochondrion	21.89	55.67
VIT_13s0067g03390.t01	Wine grape	nucleus	53.92	51.89
Os07t0695100-01	Rice	nucleus	50.41	50.27
Zm00001d007240_P001	Maize	nucleus	39.32	49.16
TraesCSU01G199500.3	Wheat	nucleus	29.32	49.09
Bra002512.1-P	Field mustard	nucleus	31.62	48.35
CDY31578	Canola	nucleus	32.03	48.27
Solyc04g049670.2.1	Tomato	nucleus	41.08	48.03
CDX80201	Canola	nucleus	30.54	47.98
EER92434	Sorghum	nucleus	48.51	46.93
Os03t0284100-01	Rice	nucleus	47.03	46.71
TraesCS4A01G105300.1	Wheat	cytosol, mitochondrion, nucleus, plastid	42.03	46.7
TraesCSU01G196100.2	Wheat	nucleus	42.3	46.23
Zm00001d047761_P005	Maize	nucleus	47.7	46.08
TraesCS2A01G081900.2	Wheat	nucleus	42.16	46.02
AT5G60100.2	Thale cress	nucleus	32.3	45.79
TraesCS4B01G198700.1	Wheat	nucleus	46.89	45.78
TraesCSU01G221500.1	Wheat	nucleus	27.16	45.58
HORVU4Hr1G057550.2	Barley	nucleus	46.35	45.19
HORVU2Hr1G013400.34	Barley	cytosol, nucleus, plastid	42.03	45.01
TraesCS2D01G079600.2	Wheat	nucleus	40.81	44.87
TraesCS4D01G199600.1	Wheat	nucleus	45.68	44.3
GSMUA_Achr9P08940_001	Banana	nucleus	26.35	29.64
GSMUA_Achr2P06760_001	Banana	nucleus	26.35	29.28
GSMUA_Achr9P24280_001	Banana	nucleus	25.27	27.99
GSMUA_Achr4P04970_001	Banana	nucleus	22.97	26.07
GSMUA_Achr4P05170_001	Banana	nucleus	23.78	23.01
GSMUA_Achr10P...	Banana	nucleus	16.49	22.51
GSMUA_Achr9P19550_001	Banana	nucleus	15.68	22.01
GSMUA_Achr2P04570_001	Banana	nucleus	16.08	21.68

Protein Annotations

MapMan:27.1.4	Gene3D:3.40.50.2300	InterPro:CCT_domain	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G01990_001	EnsemblPlants:GSMUA_Achr8P01990_001
EnsemblPlants:GSMUA_Achr8T01990_001	InterPro:IPR001789	InterPro:IPR010402	UniProt:M0TLV1	PFAM:PF00072	PFAM:PF06203
PFscan:PS50110	PFscan:PS51017	PANTHER:PTHR43874	PANTHER:PTHR43874:SF12	SMART:SM00448	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000296A8C3	SEG:seg	:	:	:

Description

Two-component response regulator-like PRR73 [Source:GMGC_GENE;Acc:GSMUA_Achr8G01990_001]

Coordinates

chr8:+:1481692..1490624

Molecular Weight (calculated)

80712.2 Da

IEP (calculated)

7.058

GRAVY (calculated)

-0.774

Length

740 amino acids

Sequence
(BLAST)

001: MAGSHRRSHD GVGTKGQATS NHQDQNGHRE VRDATAGEGQ GLSEEDESKI NVVVGDLNNN QIADVAQPSQ QCGDPQKQQQ QPLGPIVRWE RFLPIRTLKV
101: LLVENDDSTR QVVSALLRNC SYEVTAVANG LQAWKILQDL TNHIDLVITE VIMPGLTGIG LLSKIMSHKT CKTIPVIMMS SNDSMNTVFK CLSEGAVDFL
201: LKPIRKNELK NLWQHVWRRC HSVSYYSSGS GSESGIQTQK SVESKSSDDS NNSTGSNDDE NASVGLNARD GSDNGSGTQS SWTKFAAEVD SPQPMCPSYR
301: LADPPDSTCA QVILPTTETF CQDQVPTSAN SDNQGKKELP DDCMIKDLEI RGHRTLEMQY ETHQIEQDCI KLTNTKAGNL SETDPKIKGC LGALCNNVLD
401: EPSSNPIGVT ANSSDTRVLT TVIQAPSGFS KFSEGQDKIN YTSVDLPSLE LSLKRLRSIG ESRTATQVDR NVLRHSDMSA FSRYHTSSAS NQAPTGCGQS
501: CSPLDNSSEA IKTESTYNVI STSNAAPLKQ GSNGSSDNND MGSTTKNVFT KPSAFHPVQF RASESQEPAQ QNVENVTIAS ATGQSREIQH QAQAQHHHHH
601: HYHHHHHHIH NCGTSNRLLE GDAANYSING SNSGSNHSSN GHNGSHTVIQ TGGLNIESAN GIANQSGPGS GSGSGSLIDE NRLAQREAAL KKFRQKRKER
701: NFGKKVRYQS RKRLAEQRPR VRGQFVRQSV QEQSSQDADR

Best Arabidopsis Sequence Match ( AT5G02810.1 )
(BLAST)

001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS

Arabidopsis Description

APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.