Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G198700.1 | Wheat | nucleus | 94.89 | 83.38 |
| TraesCS4D01G199600.1 | Wheat | nucleus | 94.29 | 82.31 |
| HORVU4Hr1G057550.2 | Barley | nucleus | 92.19 | 80.9 |
| EER92434 | Sorghum | nucleus | 70.12 | 61.05 |
| Os03t0284100-01 | Rice | nucleus | 68.02 | 60.81 |
| Zm00001d047761_P005 | Maize | nucleus | 69.07 | 60.05 |
| TraesCS2A01G081900.2 | Wheat | nucleus | 50.3 | 49.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.5 | 42.17 |
| GSMUA_Achr8P01990_001 | Banana | cytosol, nucleus, plastid | 46.7 | 42.03 |
| Solyc04g049670.2.1 | Tomato | nucleus | 39.94 | 42.02 |
| CDX80201 | Canola | nucleus | 27.48 | 38.85 |
| GSMUA_Achr9P04240_001 | Banana | nucleus | 45.65 | 38.63 |
| VIT_13s0067g03390.t01 | Wine grape | nucleus | 44.29 | 38.36 |
| Bra002512.1-P | Field mustard | nucleus | 27.33 | 37.6 |
| CDY31578 | Canola | nucleus | 27.63 | 37.47 |
| AT5G60100.2 | Thale cress | nucleus | 28.23 | 36.02 |
| TraesCS5A01G320300.1 | Wheat | nucleus | 24.32 | 26.69 |
| TraesCS4A01G200200.1 | Wheat | nucleus | 19.07 | 19.91 |
| TraesCS6A01G227900.2 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 16.07 | 19.04 |
Protein Annotations
| MapMan:27.1.4 | Gene3D:3.40.50.2300 | InterPro:CCT_domain | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:IPR001789 | InterPro:IPR010402 | PFAM:PF00072 | PFAM:PF06203 | PFscan:PS50110 | PFscan:PS51017 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF12 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:TraesCS4A01G105300 |
| EnsemblPlants:TraesCS4A01G105300.1 | TIGR:cd00156 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4A:-:119083489..119087436
Molecular Weight (calculated)
72373.4 Da
IEP (calculated)
7.833
GRAVY (calculated)
-0.909
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKWPGTLLK RCQVIAAENG LHAWQYLEDV QNRIDLVLTE VAMPCLSGIG LLSKITSHSI CKGIPVIMMS KNDSMSTVFR CLSKGAVDFL VKPIRKNELK
101: TLWQHIWRRC HSSSGSESGI HTQKCSKPRA GDEYENNSGG SHDDDDDDDD DADDDFSVGP NARDGSDNGS GTQSSWTKRA VEIDSPQLVS SDHLADSPDS
201: TCAQVIHPRS EIGSNRWLPT ANKRNINNQK ENNDDSMGKY LEIGAPRNSS LGYQSSPNEM SVNPTEKQHE NLTCQNKSVN KIVIDKPTSQ TADLISSIAR
301: NTESKQAARI TDAPDCSSKM PNGNEMKNDS PINMPSQELG LKISETTRCG TEIQDERSIL KRSNISAFTR YHTPMASDQG GAAFRGSCSP QDNSSEAVKT
401: NSTCKMESNS DAAQIKQGSN GSSNNNDMGS STKNAIAKPC TDRERVMSPS LVKSNQQTSA FHPMQHRVSP ADAARKDKAA EEIANAVKVG HSSEAQQSSV
501: QHHHHAHYYR HVMAQQQTLI DRASNARCGS SNASDLPLEG HAANYGVNGS VSGSNNGSNT QNGSSSAPNI ARPNLDSGTM DKTEAGGGNG SGSGPSGSGN
601: DMVCQNQLSQ REAAVNKFRQ KRKERNFGKK VRYQSRKRLA EQRPRVRGQF VRQSGQEDDA GQAADR
101: TLWQHIWRRC HSSSGSESGI HTQKCSKPRA GDEYENNSGG SHDDDDDDDD DADDDFSVGP NARDGSDNGS GTQSSWTKRA VEIDSPQLVS SDHLADSPDS
201: TCAQVIHPRS EIGSNRWLPT ANKRNINNQK ENNDDSMGKY LEIGAPRNSS LGYQSSPNEM SVNPTEKQHE NLTCQNKSVN KIVIDKPTSQ TADLISSIAR
301: NTESKQAARI TDAPDCSSKM PNGNEMKNDS PINMPSQELG LKISETTRCG TEIQDERSIL KRSNISAFTR YHTPMASDQG GAAFRGSCSP QDNSSEAVKT
401: NSTCKMESNS DAAQIKQGSN GSSNNNDMGS STKNAIAKPC TDRERVMSPS LVKSNQQTSA FHPMQHRVSP ADAARKDKAA EEIANAVKVG HSSEAQQSSV
501: QHHHHAHYYR HVMAQQQTLI DRASNARCGS SNASDLPLEG HAANYGVNGS VSGSNNGSNT QNGSSSAPNI ARPNLDSGTM DKTEAGGGNG SGSGPSGSGN
601: DMVCQNQLSQ REAAVNKFRQ KRKERNFGKK VRYQSRKRLA EQRPRVRGQF VRQSGQEDDA GQAADR
001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
Arabidopsis Description
APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.