Factsheet for TraesCS2A01G081900.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G199500.3	Wheat	nucleus	63.27	97.06
TraesCSU01G196100.2	Wheat	nucleus	95.28	95.42
TraesCS2D01G079600.2	Wheat	nucleus	94.25	94.95
TraesCSU01G221500.1	Wheat	nucleus	58.7	90.25
HORVU2Hr1G013400.34	Barley	cytosol, nucleus, plastid	90.56	88.86
Os07t0695100-01	Rice	nucleus	67.4	61.59
Zm00001d007240_P001	Maize	nucleus	51.03	58.45
OQU81435	Sorghum	mitochondrion	24.34	56.7
TraesCS4A01G105300.1	Wheat	cytosol, mitochondrion, nucleus, plastid	49.41	50.3
GSMUA_Achr8P01990_001	Banana	cytosol, nucleus, plastid	46.02	42.16
GSMUA_AchrUn_...	Banana	nucleus	47.49	42.04
Solyc04g049670.2.1	Tomato	nucleus	36.87	39.49
VIT_13s0067g03390.t01	Wine grape	nucleus	44.54	39.27
CDY31578	Canola	nucleus	28.17	38.9
CDX80201	Canola	nucleus	26.99	38.85
Bra002512.1-P	Field mustard	nucleus	27.58	38.64
GSMUA_Achr9P04240_001	Banana	nucleus	44.25	38.12
AT5G60100.2	Thale cress	nucleus	28.47	36.97
TraesCS5A01G320300.1	Wheat	nucleus	23.3	26.03
TraesCS4A01G200200.1	Wheat	nucleus	21.39	22.73
TraesCS6A01G227900.2	Wheat	endoplasmic reticulum, plasma membrane, plastid	16.08	19.39

Protein Annotations

MapMan:27.1.4	Gene3D:3.40.50.2300	InterPro:CCT_domain	InterPro:CheY-like_superfamily	ncoils:Coil	GO:GO:0000003
GO:GO:0000160	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0048579	InterPro:IPR001789	InterPro:IPR010402
PFAM:PF00072	PFAM:PF06203	PFscan:PS50110	PFscan:PS51017	PANTHER:PTHR43874	PANTHER:PTHR43874:SF12
SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	EnsemblPlantsGene:TraesCS2A01G081900	EnsemblPlants:TraesCS2A01G081900.2	TIGR:cd00156
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:36933684..36938202

Molecular Weight (calculated)

73128.5 Da

IEP (calculated)

8.384

GRAVY (calculated)

-0.898

Length

678 amino acids

Sequence
(BLAST)

001: MRPRPPPPSA MDRHHHHHQQ QQQQPPSPQE EHAAQPRCWE EFLHRKTIRV LLVETDDSTR QVVTALLRHC MYQVIPAENG HQAWAYLQDM QSNIDLVLTE
101: VFMHGGLSGI DLLGRIMNHE VCKDIPVIMM SSHDSMGTVL SCLSNGAADF LAKPIRKNEL KNLWAHVWRR SHSSSGSGSG SAIQTQKCTK SKSGDDSNNN
201: SNNRNDDASM GLNARDGSDN GSGTQSSWTK RAVEIDSPQD MSPDQSIDPP DSTCAHVSHL KSEICSNRLR GTDNKKCQKP KETNGDEFKG KELEIGAPGN
301: LNTDDQSSPN ESSVKPTDGR CEYLPQNNSN DTVMENSDEP IVRAADLIGS MAKNMDAQQA ARAIDAPNCS SQVPEGKDAD RENAMPYLEL SLKRSRSTAD
401: DADAAIQEEQ RNVVRRSDLS AFTRYNTCAV SNQGRAGFVG SCSPNGNSSE AAKTDAAQMK QGSNGSSNNN DMGSTTKSVV TKPAGGNNKV SPINGNTHTS
501: AFHRVQPWTP ATAAGKDKAD ETSKKNAATA AAAAKDMSGE AQSKHPCAAA HDANGGSAGG TAQSSLVNPS GPVEGHAANY GSNSGSNNNT NNGSTAATAA
601: GAAAAVHAET GGIDKRSNMM HMKRERRVAA VNKFREKRKE RNFGKKVRYQ SRKRLAEQRP RVRGQFVRQP PPPAAVER

Best Arabidopsis Sequence Match ( AT5G02810.1 )
(BLAST)

001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS

Arabidopsis Description

APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.