Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G221500.1 | Wheat | nucleus | 91.63 | 91.84 |
| TraesCSU01G196100.2 | Wheat | nucleus | 99.55 | 64.99 |
| TraesCS2A01G081900.2 | Wheat | nucleus | 97.06 | 63.27 |
| TraesCS2D01G079600.2 | Wheat | nucleus | 95.48 | 62.7 |
| HORVU2Hr1G013400.34 | Barley | cytosol, nucleus, plastid | 90.72 | 58.03 |
| OQU81435 | Sorghum | mitochondrion | 36.88 | 56.01 |
| Os07t0695100-01 | Rice | nucleus | 71.49 | 42.59 |
| Zm00001d007240_P001 | Maize | nucleus | 51.36 | 38.34 |
| CDY31578 | Canola | nucleus | 34.39 | 30.96 |
| CDX80201 | Canola | nucleus | 32.81 | 30.79 |
| Bra002512.1-P | Field mustard | nucleus | 33.48 | 30.58 |
| AT5G60100.2 | Thale cress | nucleus | 35.07 | 29.69 |
| GSMUA_Achr8P01990_001 | Banana | cytosol, nucleus, plastid | 49.09 | 29.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.0 | 28.85 |
| VIT_13s0067g03390.t01 | Wine grape | nucleus | 46.83 | 26.92 |
| GSMUA_Achr9P04240_001 | Banana | nucleus | 47.51 | 26.68 |
| Solyc04g049670.2.1 | Tomato | nucleus | 35.07 | 24.49 |
Protein Annotations
| EnsemblPlants:TraesCSU01G199500.3 | EnsemblPlantsGene:TraesCSU01G199500 | Gene3D:3.40.50.2300 | GO:GO:0000160 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF12 | PFAM:PF00072 | PFscan:PS50110 | SEG:seg | SMART:SM00448 | SUPFAM:SSF52172 |
| TIGR:cd00156 | MapMan:27.1.4 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:297414261..297416639
Molecular Weight (calculated)
48478.1 Da
IEP (calculated)
6.152
GRAVY (calculated)
-0.832
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPRPPPPSA MDRHHHQQQQ QPPSPQGDHA AQPRCWEEFL HRKTIRVLLV ETDDSTRQVV TALLRHCMYQ VIPAENGHQA WAYLQDMQSN IDLVLTEVFM
101: HGGLSGIDLL GRIMNHEVCK DIPVIMMSSH NSMGTVLSCL SNGAADFLAK PIRKNELKNL WAHVWRRSHS SSGSGSGSAI QTQKCTKSKS ADDSNNNSNN
201: RNDDASMGLN ARDGSDNGSG TQSSWTKRAV EIDSPQDMSP DQSVDPPDST CAHVSHLKSE ICSNRLRGTD NKKCQKPKET NGDEFKGKEL EIGAPGNLNT
301: DDQSSPNESS VKPTDNGRCE YLPQNNSNDT VMENSDEPIV RAADLIGSMA KNMDAQQAAR AIDAPNCSSQ VPEGKDADRE NAMPYLELSL KRSRSTTEGA
401: DAIQEEQRNV VRRSDLSAFT RYNTCSFSNQ GGAGFVGSCS PT
101: HGGLSGIDLL GRIMNHEVCK DIPVIMMSSH NSMGTVLSCL SNGAADFLAK PIRKNELKNL WAHVWRRSHS SSGSGSGSAI QTQKCTKSKS ADDSNNNSNN
201: RNDDASMGLN ARDGSDNGSG TQSSWTKRAV EIDSPQDMSP DQSVDPPDST CAHVSHLKSE ICSNRLRGTD NKKCQKPKET NGDEFKGKEL EIGAPGNLNT
301: DDQSSPNESS VKPTDNGRCE YLPQNNSNDT VMENSDEPIV RAADLIGSMA KNMDAQQAAR AIDAPNCSSQ VPEGKDADRE NAMPYLELSL KRSRSTTEGA
401: DAIQEEQRNV VRRSDLSAFT RYNTCSFSNQ GGAGFVGSCS PT
001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
Arabidopsis Description
APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.