CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G199500.3	Wheat	nucleus	56.01	36.88
TraesCSU01G221500.1	Wheat	nucleus	55.67	36.73
Os07t0695100-01	Rice	nucleus	67.7	26.55
CDX80201	Canola	nucleus	40.89	25.27
CDY31578	Canola	nucleus	41.58	24.64
Bra002512.1-P	Field mustard	nucleus	40.55	24.38
TraesCS2D01G079600.2	Wheat	nucleus	56.36	24.37
TraesCS2A01G081900.2	Wheat	nucleus	56.7	24.34
TraesCSU01G196100.2	Wheat	nucleus	56.01	24.08
AT5G60100.2	Thale cress	nucleus	42.61	23.75
HORVU2Hr1G013400.34	Barley	cytosol, nucleus, plastid	56.36	23.73
EER92434	Sorghum	nucleus	61.51	23.4
Zm00001d007240_P001	Maize	nucleus	46.39	22.8
GSMUA_Achr8P01990_001	Banana	cytosol, nucleus, plastid	55.67	21.89
GSMUA_AchrUn_...	Banana	nucleus	56.01	21.28
GSMUA_Achr9P04240_001	Banana	nucleus	54.3	20.08
VIT_13s0067g03390.t01	Wine grape	nucleus	51.55	19.51
Solyc04g049670.2.1	Tomato	nucleus	37.46	17.22
EER99234	Sorghum	nucleus	32.3	14.92
EES08014	Sorghum	nucleus	34.71	14.49
EES05438	Sorghum	nucleus	21.65	12.02

Protein Annotations

MapMan:27.1.4	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	UniProt:G4XFK4	GO:GO:0000003	GO:GO:0000160
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0048579
InterPro:IPR001789	EMBL:JF801187	EMBL:JX512482	EnsemblPlants:OQU81435	ProteinID:OQU81435	ProteinID:OQU81435.1
PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF12	SMART:SM00448	EnsemblPlantsGene:SORBI_3006G057866
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI00022BDBF8	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:40304883..40316799

Molecular Weight (calculated)

31979.3 Da

IEP (calculated)

4.892

GRAVY (calculated)

-0.646

Length

291 amino acids

Sequence
(BLAST)

001: MRGVCSQQLA TVDGPSLRDA TRMMLRNNNN NLRSNGPSDG LLSRPTPAVL QDDDDGGDDD TENQQQEAVY WERFLQKKTI NVLLVESDDC TRRVVSALLR
101: HCMYQVISAE NGQQAWNYLE DKQNNIDIVL IEVFMPGVSG ISLLSRIMSH NICKNIPVIM MSSNDARNTV FKCLSKGAVD FLVNPIRKNE LKNLWQHVWR
201: RCHSSSGSGS ESGIQTQKCG KSKGGKESGN NSGSNDSHDN EADMGLNARD DSDNGSGTQA QSSWTKCAVE MDSPQAMSLD QLADSPDSTC A

Best Arabidopsis Sequence Match ( AT5G02810.1 )
(BLAST)

001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS

Arabidopsis Description

APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.