CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05438

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46790.1	EES05438	AT5G61380.1	20407420
AT5G24470.1	EES05438	AT5G61380.1	20407420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006212_P002	Maize	nucleus	89.52	89.24
Zm00001d021291_P002	Maize	mitochondrion, plastid	91.11	84.54
Zm00001d016258_P001	Maize	cytosol	27.46	83.57
Os09t0532400-01	Rice	nucleus	75.24	76.08
TraesCS5A01G320300.1	Wheat	nucleus	64.29	66.72
TraesCS5B01G320500.1	Wheat	nucleus	63.97	66.28
HORVU5Hr1G081620.4	Barley	nucleus	64.76	66.13
TraesCS5D01G326200.3	Wheat	nucleus	60.16	60.83
GSMUA_Achr9P24280_001	Banana	nucleus	42.38	39.97
Bra004507.1-P	Field mustard	nucleus	25.71	39.32
CDY41558	Canola	nucleus	25.71	39.32
CDY59590	Canola	nucleus	30.32	39.22
GSMUA_Achr4P04970_001	Banana	nucleus	39.84	38.5
CDY05436	Canola	nucleus	30.0	37.43
Bra029407.1-P	Field mustard	nucleus	30.16	37.33
AT2G46790.1	Thale cress	nucleus	27.3	36.75
Bra036517.1-P	Field mustard	nucleus	28.89	36.62
CDY19831	Canola	nucleus	28.89	36.62
CDX80047	Canola	nucleus	23.02	36.52
CDX87123	Canola	nucleus	28.89	35.69
VIT_15s0048g02540.t01	Wine grape	nucleus	36.03	35.41
CDY48015	Canola	nucleus	25.56	34.92
AT5G24470.1	Thale cress	cytosol, nucleus, plastid	30.79	34.77
Bra009768.1-P	Field mustard	nucleus	30.63	34.28
CDX80448	Canola	nucleus	30.16	34.11
Solyc03g081240.2.1	Tomato	nucleus	36.03	33.38
GSMUA_Achr4P05170_001	Banana	nucleus	40.48	33.33
VIT_16s0098g00900.t01	Wine grape	nucleus	36.19	33.14
OQU81435	Sorghum	mitochondrion	14.92	32.3
KRH64297	Soybean	nucleus	34.92	31.84
KRG97248	Soybean	nucleus	34.13	31.39
KRH68964	Soybean	nucleus	34.13	31.07
KRH53629	Soybean	nucleus	34.13	30.71
PGSC0003DMT400001574	Potato	nucleus	33.02	30.45
KRH47791	Soybean	nucleus	34.13	29.78
PGSC0003DMT400029402	Potato	nucleus	29.68	29.22
KRH06354	Soybean	nucleus	32.7	29.18
Solyc10g005030.2.1	Tomato	nucleus	28.89	28.22
CDX88107	Canola	plastid	30.63	27.73
EES08014	Sorghum	nucleus	28.89	26.11
EER92434	Sorghum	nucleus	29.37	24.18
EES05438	Sorghum	nucleus	18.89	22.71
CDY27522	Canola	nucleus	25.71	18.82
Bra040484.1-P	Field mustard	cytosol	22.54	17.23

Protein Annotations

MapMan:27.1.4	Gene3D:3.40.50.12740	UniProt:C5X668	InterPro:CCT_domain	InterPro:CheY-like_superfamily	EnsemblPlants:EER99234
ProteinID:EER99234	ProteinID:EER99234.2	GO:GO:0000160	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	InterPro:IPR010402	PFAM:PF00072	PFAM:PF06203
PFscan:PS50110	PFscan:PS51017	PANTHER:PTHR43874	PANTHER:PTHR43874:SF11	SMART:SM00448	EnsemblPlantsGene:SORBI_3002G275100
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI00081AE926	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:65784647..65790025

Molecular Weight (calculated)

70211.2 Da

IEP (calculated)

6.618

GRAVY (calculated)

-0.827

Length

630 amino acids

Sequence
(BLAST)

001: MGGGVDEVVK VVVDLEDGEG EEDAEAAAAE GSSRETRMLP RMPVRVLLAE GDDSTRHVIS ALLRKCGYRV AAASDGVKAW DILKEKSFNI DLVLTEVDLP
101: LMSGFLLLST IMEHDASKNI PVIMMSSHDS VSMVFKCMLK GAADFLVKPI RKNELRNLWQ HVWRKQLANG GSDVHHIQQE ENLAERIEQK TGVTKADNLN
201: RDGPRKNREC SEQESDAQSS CTRSELEAES KQTNNILEYK QSTERHLSIP SHKNVELNGQ TKIRSKDNNL IPTREDDLSP KKRTCLNDNN SERASKDMDL
301: VHIMDNQQKH NTQREVDTMR TTSRGNDEKG SIPAHQLELS LRRTDYGKLE NHDKNDRRTL NHSTSSAFSL YNCRAVSTSG NAGDGQLCST SETLMDVENK
401: NGDSAAPSQD MTETNRPPIR VVPFPVPVQG LTFDGQPFWN GTPMASLFYP QSAPPIWNSK TSMWQESTQA TSLPQKSQQN EPNEMGAKPV ENAEEQFVTG
501: PPSASGKQLC VEVPKDDPRH ISPMTGESGI STMLDSTRNT LSSSGCDSTS NQFTAPTESS NVYKGVPETP STEGSRHLSQ REAALNKFRL KRKDRCFEKK
601: VRYQSRKLLA EQRPRVKGQF VRQDHSIQGS

Best Arabidopsis Sequence Match ( AT5G24470.1 )
(BLAST)

001: MTSSEEVVEV TVVKAPEAGG GKLSRRKIRK KDAGVDGLVK WERFLPKIAL RVLLVEADDS TRQIIAALLR KCSYRVAAVP DGLKAWEMLK GKPESVDLIL
101: TEVDLPSISG YALLTLIMEH DICKNIPVIM MSTQDSVNTV YKCMLKGAAD YLVKPLRRNE LRNLWQHVWR RQTSLAPDSF PWNESVGQQK AEGASANNSN
201: GKRDDHVVSG NGGDAQSSCT RPEMEGESAD VEVSARDAVQ MECAKSQFNE TRLLANELQS KQAEAIDFMG ASFRRTGRRN REESVAQYES RIELDLSLRR
301: PNASENQSSG DRPSLHPSSA SAFTRYVHRP LQTQCSASPV VTDQRKNVAA SQDDNIVLMN QYNTSEPPPN APRRNDTSFY TGADSPGPPF SNQLNSWPGQ
401: SSYPTPTPIN NIQFRDPNTA YTSAMAPASL SPSPSSVSPH EYSSMFHPFN SKPEGLQDRD CSMDVDERRY VSSATEHSAI GNHIDQLIEK KNEDGYSLSV
501: GKIQQSLQRE AALTKFRMKR KDRCYEKKVR YESRKKLAEQ RPRIKGQFVR QVQSTQAP

Arabidopsis Description

APRR5Two-component response regulator-like APRR5 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA42]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.