CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47791	Soybean	nucleus	88.81	86.84
KRG97248	Soybean	nucleus	59.63	61.46
KRH68964	Soybean	nucleus	59.07	60.26
VIT_15s0048g02540.t01	Wine grape	nucleus	34.99	38.53
KRH64297	Soybean	nucleus	34.99	35.75
KRH53629	Soybean	nucleus	34.99	35.29
PGSC0003DMT400029402	Potato	nucleus	31.3	34.53
TraesCS5B01G320500.1	Wheat	nucleus	29.04	33.72
TraesCS5A01G320300.1	Wheat	nucleus	28.75	33.44
Solyc10g005030.2.1	Tomato	nucleus	30.45	33.33
Os09t0532400-01	Rice	nucleus	28.9	32.74
HORVU5Hr1G081620.4	Barley	nucleus	28.61	32.74
EER99234	Sorghum	nucleus	29.18	32.7
Zm00001d006212_P002	Maize	nucleus	28.61	31.96
GSMUA_Achr9P24280_001	Banana	nucleus	30.17	31.89
GSMUA_Achr4P04970_001	Banana	nucleus	28.33	30.67
Zm00001d021291_P002	Maize	mitochondrion, plastid	29.04	30.19
TraesCS5D01G326200.3	Wheat	nucleus	26.63	30.18
Zm00001d016258_P001	Maize	cytosol	8.78	29.95
GSMUA_Achr4P05170_001	Banana	nucleus	28.75	26.54
KRH32378	Soybean	nucleus	26.06	24.44
KRH19783	Soybean	nucleus	25.92	24.24
KRH63298	Soybean	nucleus	17.85	22.5
KRH54582	Soybean	nucleus	17.28	21.86
KRH56889	Soybean	nucleus	17.28	21.22
KRH03510	Soybean	nucleus	17.14	20.9
KRH24970	Soybean	cytosol, endoplasmic reticulum, nucleus	17.85	20.13
KRG88711	Soybean	nucleus	19.41	17.91

Protein Annotations

EntrezGene:100802674	MapMan:27.1.4	Gene3D:3.40.50.12740	EMBL:ACUP02009827	InterPro:CCT_domain	InterPro:CheY-like_superfamily
EnsemblPlantsGene:GLYMA_16G018000	GO:GO:0000160	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	UniProt:I1MKC2	InterPro:IPR001789	InterPro:IPR010402	EnsemblPlants:KRH06354	ProteinID:KRH06354
ProteinID:KRH06354.1	PFAM:PF00072	PFAM:PF06203	PFscan:PS50110	PFscan:PS51017	PANTHER:PTHR43874
PANTHER:PTHR43874:SF11	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000233C035	SEG:seg

Description

hypothetical protein

Coordinates

chr16:-:1601748..1607341

Molecular Weight (calculated)

78285.3 Da

IEP (calculated)

6.013

GRAVY (calculated)

-0.618

Length

706 amino acids

Sequence
(BLAST)

001: MDELNCAMTT TTTENSNAEL VQWERFLPRM VLRVLLVEAD HSTRQIIAAL LRKCIIAVPD GLKAWETLKK KASELDLILT EVELPAISGF ALLSLIMEHD
101: ICKSIPVIMM SSHDSVNMAL KCMLNGAVDF LIKPIRKNEL RNLWQHVWRR HTIITPTQNT TFSPKKLKTA SEDNSASNKS NGSVASSKKN NECSERLSEA
201: QSTCTSPIME AASTYMENMQ DVSQDVHCQV MQTHVQSTCA SPIFEAESTF VENMQDVPQL ESSKLNKIDM VDHEKFAKFE RKSAKHNDET EDKSITIVSE
301: AARCDKSFEL TDLMLEQDCG VAEPETENED EILKSELGRD NSHVSILHGC NAEQVKPSKG AIDLIATFGN LPKHPNENCS LNGGNTTKFD CETQLELSLR
401: SDFPGSSGKQ ASESTEESQR LNHSNTSAFS WYSNSKLLQP LFSPPSITSP KVNWLNWDSH ECLKLSGNCQ YDDSNQNLEN MISTVIGQYG LLPVSGVISK
501: LKSEGHGHVF TSVFYAQSGI HPMLSPKPVC QNESSPFPTS TSSQSNPESH CSDQPHDCSN DATCLDQNVK DNTDSDHARH ESPAADQSAG NNLCHDAANH
601: VNSSAYGSMD SGNDGHATSA IVSKNTSDGF SDSGCHNYDG FRVTDSHRSS QREAALVKFR LKRKERCFEK KVRYQSRKRL AEQRPRVKGQ FVRQHNHPFA
701: EAGGDS

Best Arabidopsis Sequence Match ( AT2G46790.1 )
(BLAST)

001: MGEIVVLSSD DGMETIKNRV KSSEVVQWEK YLPKTVLRVL LVESDYSTRQ IITALLRKCC YKVVAVSDGL AAWEVLKEKS HNIDLILTEL DLPSISGFAL
101: LALVMEHEAC KNIPVIMMSS QDSIKMVLKC MLRGAADYLI KPMRKNELKN LWQHVWRRLT LRDDPTAHAQ SLPASQHNLE DTDETCEDSR YHSDQGSGAQ
201: AINYNGHNKL MENGKSVDER DEFKETFDVT MDLIGGIDKR PDSIYKDKSR DECVGPELGL SLKRSCSVSF ENQDESKHQK LSLSDASAFS RFEESKSAEK
301: AVVALEESTS GEPKTPTESH EKLRKVTSDQ GSATTSSNQE NIGSSSVSFR NQVLQSTVTN QKQDSPIPVE SNREKAASKE VEAGSQSTNE GIAGQSSSTE
401: KPKEEESAKQ RWSRSQREAA LMKFRLKRKD RCFDKKVRYQ SRKKLAEQRP RVKGQFVRTV NSDASTKS

Arabidopsis Description

APRR9Two-component response regulator-like APRR9 [Source:UniProtKB/Swiss-Prot;Acc:Q8L500]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.