CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68964	Soybean	nucleus	89.2	88.29
KRH47791	Soybean	nucleus	64.09	60.8
KRH06354	Soybean	nucleus	61.46	59.63
VIT_15s0048g02540.t01	Wine grape	nucleus	36.93	39.47
KRH64297	Soybean	nucleus	36.79	36.47
KRH53629	Soybean	nucleus	36.79	36.0
PGSC0003DMT400029402	Potato	nucleus	33.43	35.78
Os09t0532400-01	Rice	nucleus	31.24	34.35
EER99234	Sorghum	nucleus	31.39	34.13
Solyc10g005030.2.1	Tomato	nucleus	32.12	34.11
TraesCS5B01G320500.1	Wheat	nucleus	30.22	34.05
TraesCS5A01G320300.1	Wheat	nucleus	29.93	33.77
HORVU5Hr1G081620.4	Barley	nucleus	30.22	33.55
Zm00001d006212_P002	Maize	nucleus	30.51	33.07
Zm00001d021291_P002	Maize	mitochondrion, plastid	31.09	31.37
GSMUA_Achr9P24280_001	Banana	nucleus	30.51	31.29
GSMUA_Achr4P04970_001	Banana	nucleus	29.64	31.14
TraesCS5D01G326200.3	Wheat	nucleus	28.18	30.98
Zm00001d016258_P001	Maize	cytosol	8.91	29.47
GSMUA_Achr4P05170_001	Banana	nucleus	28.76	25.75
KRH32378	Soybean	nucleus	26.72	24.3
KRH19783	Soybean	nucleus	26.72	24.24
KRH63298	Soybean	nucleus	18.39	22.5
KRH54582	Soybean	nucleus	17.66	21.68
KRH56889	Soybean	nucleus	17.66	21.04
KRH03510	Soybean	nucleus	17.52	20.73
KRH24970	Soybean	cytosol, endoplasmic reticulum, nucleus	18.39	20.13
KRG88711	Soybean	nucleus	19.71	17.65

Protein Annotations

EntrezGene:100809490	MapMan:27.1.4	Gene3D:3.40.50.12740	EMBL:ACUP02012181	InterPro:CCT_domain	InterPro:CheY-like_superfamily
EnsemblPlantsGene:GLYMA_19G260400	GO:GO:0000160	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	UniProt:I1NCR4	InterPro:IPR001789	InterPro:IPR010402	ProteinID:KRG97247.1	EnsemblPlants:KRG97248
ProteinID:KRG97248	ProteinID:KRG97248.1	PFAM:PF00072	PFAM:PF06203	PFscan:PS50110	PFscan:PS51017
PANTHER:PTHR43874	PANTHER:PTHR43874:SF11	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0001CAAEE5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:50364306..50369265

Molecular Weight (calculated)

76092.7 Da

IEP (calculated)

7.089

GRAVY (calculated)

-0.680

Length

685 amino acids

Sequence
(BLAST)

001: MGEVPAVMQA TQGEQSNNAS AVHWERFLPR MVLRVLLVEA DDSTRQIIAA LLRKCGYKVV AFCDGLKAWE TLKNKAFDLD LILTEVDLPS ISGFSLLTLI
101: MEHDICKNIP VIMMSSHDSV SMVFKCMLKG AADFLIKPVR KNELRNLWQH VWRRHAISRP PQNLTLPEIE LGFAAENHAA SNDSSGSVAS TPKDDECSEK
201: TSEAHSTCPS PFLEAESTYM ENMQDILQLK SSSNLSNIDT VKHENSTKCE RESDKHNDEA GEKSLFILED ARCNKTFKPT GLRLGQSYEC HETRNQDEVL
301: RIELIKSNPE INTDIHRCSD ELVDPSTGAI DLIATFKNLP KSTDEKCSFS SGNTAKFDFD TQLELSLRRD FPGSSCKAAF KERQILNHSN ASAFSRYSNS
401: KLLQPLFPTP STISAKLTNA SQNSHESLKL SKNTSTSHQY SEKSQNQEEK IITSVIGQSG QVDPKLPNSQ LGLFPATGVT SDHKSKGNGN VFPSKLYAKS
501: GVHPISTPKS VCQKESSPFP TSTSSQSNPQ SHNSERHHWL EDATHASDQN VNDQSNLECE THDSPAASQS AGPSFFHDTA NHNSSGVYRS DGNATSAKVA
601: KESHEIFIDS GQRSYDGFIG TDSHRTSQRE AALTKFRLKR KDRCYEKKVR YQSRKRLAEQ RPRVKGQFVR QVHDDHPVAD VGGGS

Best Arabidopsis Sequence Match ( AT2G46790.1 )
(BLAST)

001: MGEIVVLSSD DGMETIKNRV KSSEVVQWEK YLPKTVLRVL LVESDYSTRQ IITALLRKCC YKVVAVSDGL AAWEVLKEKS HNIDLILTEL DLPSISGFAL
101: LALVMEHEAC KNIPVIMMSS QDSIKMVLKC MLRGAADYLI KPMRKNELKN LWQHVWRRLT LRDDPTAHAQ SLPASQHNLE DTDETCEDSR YHSDQGSGAQ
201: AINYNGHNKL MENGKSVDER DEFKETFDVT MDLIGGIDKR PDSIYKDKSR DECVGPELGL SLKRSCSVSF ENQDESKHQK LSLSDASAFS RFEESKSAEK
301: AVVALEESTS GEPKTPTESH EKLRKVTSDQ GSATTSSNQE NIGSSSVSFR NQVLQSTVTN QKQDSPIPVE SNREKAASKE VEAGSQSTNE GIAGQSSSTE
401: KPKEEESAKQ RWSRSQREAA LMKFRLKRKD RCFDKKVRYQ SRKKLAEQRP RVKGQFVRTV NSDASTKS

Arabidopsis Description

APRR9Two-component response regulator-like APRR9 [Source:UniProtKB/Swiss-Prot;Acc:Q8L500]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.