CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97248	Soybean	nucleus	88.29	89.2
KRH47791	Soybean	nucleus	63.15	60.53
KRH06354	Soybean	nucleus	60.26	59.07
VIT_15s0048g02540.t01	Wine grape	nucleus	36.27	39.16
KRH64297	Soybean	nucleus	36.27	36.32
KRH53629	Soybean	nucleus	36.13	35.71
PGSC0003DMT400029402	Potato	nucleus	32.95	35.62
TraesCS5B01G320500.1	Wheat	nucleus	30.06	34.21
EER99234	Sorghum	nucleus	31.07	34.13
Os09t0532400-01	Rice	nucleus	30.64	34.03
Solyc10g005030.2.1	Tomato	nucleus	31.5	33.8
TraesCS5A01G320300.1	Wheat	nucleus	29.62	33.77
HORVU5Hr1G081620.4	Barley	nucleus	30.06	33.71
Zm00001d006212_P002	Maize	nucleus	30.2	33.07
Zm00001d021291_P002	Maize	mitochondrion, plastid	30.92	31.52
GSMUA_Achr9P24280_001	Banana	nucleus	30.35	31.44
TraesCS5D01G326200.3	Wheat	nucleus	27.89	30.98
GSMUA_Achr4P04970_001	Banana	nucleus	29.05	30.83
Zm00001d016258_P001	Maize	cytosol	8.96	29.95
GSMUA_Achr4P05170_001	Banana	nucleus	27.75	25.1
KRH19783	Soybean	nucleus	26.16	23.97
KRH32378	Soybean	nucleus	25.87	23.77
KRH63298	Soybean	nucleus	18.21	22.5
KRH54582	Soybean	nucleus	17.63	21.86
KRH56889	Soybean	nucleus	17.2	20.7
KRH24970	Soybean	cytosol, endoplasmic reticulum, nucleus	18.64	20.61
KRH03510	Soybean	nucleus	17.05	20.38
KRG88711	Soybean	nucleus	19.36	17.52

Protein Annotations

EntrezGene:100779346	MapMan:27.1.4	Gene3D:3.40.50.2300	EMBL:ACUP02002128	InterPro:CCT_domain	InterPro:CheY-like_superfamily
EnsemblPlantsGene:GLYMA_03G261300	GO:GO:0000160	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	InterPro:IPR001789	InterPro:IPR010402	UniProt:K7KH59	ProteinID:KRH68963.1	EnsemblPlants:KRH68964
ProteinID:KRH68964	ProteinID:KRH68964.1	PFAM:PF00072	PFAM:PF06203	PFscan:PS50110	PFscan:PS51017
PANTHER:PTHR43874	PANTHER:PTHR43874:SF11	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0002966CAF
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:45481749..45486838

Molecular Weight (calculated)

76529.0 Da

IEP (calculated)

6.761

GRAVY (calculated)

-0.649

Length

692 amino acids

Sequence
(BLAST)

001: MGLVAADKGS MQTQEEQSDN ASAVQWERFL PRMVLRVLLV EADDSTRQII SALLHKCSYK VVAFCDGLKA WETLKNKPSD IDLILTEVDL PSISGFSLLT
101: LIMEHDICKN IPVIMMSSHD SVSMVLKCML KGAADFLIKP VRRNELRNLW QHVWRRHAIS RPPQNFTLPE IEIGFAAENH AASNDSSGSV ASTAKNGECS
201: EKTSEAQSTC TSPFLEAEST YLENMQDISQ LKRSSNLSNI DTVKHENSTK CERESDKHND EAGEKSLFVS EDSRCNKTFK PTGLRLGQGY ECCETRNQDV
301: VLKIELIKSN PEINTDIHGC SDELVDPYTG AIDLIATFKN LPKSTDEKCS FSSGNTAKFD FDTQLELSLR RRDFPGSSCK AASEERQLLN HSNASAFSRY
401: SSSKLLQPLF PTPSTISAKL TNSSLSSHES HKFSENASTS HQYGGKNQNQ EKIITPVIGQ SGQVDPKLPN SQLGYFPATG VTSDHKSTGN GNVFPSMLYA
501: ESGVHPIWTP KSVCQKESSP FPTITSSQSN PQSHNSECHL WSEDSTHASD KNLNDQINLD CETHDSPDAS QSAGTSFFHD TANHNSSGVY RSMGCRSDGN
601: ATSAKVAKES HGSFIDSGHC SYDGFIGTDS HRTSHREAAL TKFRLKRKDR CYEKKVRYQS RKRLAEQRPR VKGQFVRQVQ DDHPVADVGG GS

Best Arabidopsis Sequence Match ( AT5G24470.1 )
(BLAST)

001: MTSSEEVVEV TVVKAPEAGG GKLSRRKIRK KDAGVDGLVK WERFLPKIAL RVLLVEADDS TRQIIAALLR KCSYRVAAVP DGLKAWEMLK GKPESVDLIL
101: TEVDLPSISG YALLTLIMEH DICKNIPVIM MSTQDSVNTV YKCMLKGAAD YLVKPLRRNE LRNLWQHVWR RQTSLAPDSF PWNESVGQQK AEGASANNSN
201: GKRDDHVVSG NGGDAQSSCT RPEMEGESAD VEVSARDAVQ MECAKSQFNE TRLLANELQS KQAEAIDFMG ASFRRTGRRN REESVAQYES RIELDLSLRR
301: PNASENQSSG DRPSLHPSSA SAFTRYVHRP LQTQCSASPV VTDQRKNVAA SQDDNIVLMN QYNTSEPPPN APRRNDTSFY TGADSPGPPF SNQLNSWPGQ
401: SSYPTPTPIN NIQFRDPNTA YTSAMAPASL SPSPSSVSPH EYSSMFHPFN SKPEGLQDRD CSMDVDERRY VSSATEHSAI GNHIDQLIEK KNEDGYSLSV
501: GKIQQSLQRE AALTKFRMKR KDRCYEKKVR YESRKKLAEQ RPRIKGQFVR QVQSTQAP

Arabidopsis Description

APRR5Two-component response regulator-like APRR5 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA42]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.