Factsheet for Zm00001d006212_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003811_P001
Zm00001d005366_P001
Zm00001d017241_P002
Zm00001d018818_P001
Zm00001d043140_P001
Zm00001d044406_P001
Zm00001d051114_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46790.1	Zm00001d003811_P001	AT5G61380.1	20407420
AT2G46790.1	Zm00001d005366_P001	AT5G61380.1	20407420
AT2G46790.1	Zm00001d017241_P002	AT5G61380.1	20407420
AT2G46790.1	Zm00001d018818_P001	AT5G61380.1	20407420
AT2G46790.1	Zm00001d043140_P001	AT5G61380.1	20407420
AT2G46790.1	Zm00001d044406_P001	AT5G61380.1	20407420
AT2G46790.1	Zm00001d051114_P001	AT5G61380.1	20407420
AT5G24470.1	Zm00001d003811_P001	AT5G61380.1	20407420
AT5G24470.1	Zm00001d005366_P001	AT5G61380.1	20407420
AT5G24470.1	Zm00001d017241_P002	AT5G61380.1	20407420
AT5G24470.1	Zm00001d018818_P001	AT5G61380.1	20407420
AT5G24470.1	Zm00001d043140_P001	AT5G61380.1	20407420
AT5G24470.1	Zm00001d044406_P001	AT5G61380.1	20407420
AT5G24470.1	Zm00001d051114_P001	AT5G61380.1	20407420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99234	Sorghum	nucleus	89.24	89.52
Zm00001d021291_P002	Maize	mitochondrion, plastid	87.34	81.3
Zm00001d016258_P001	Maize	cytosol	26.42	80.68
Os09t0532400-01	Rice	nucleus	72.31	73.35
TraesCS5A01G320300.1	Wheat	nucleus	62.03	64.58
HORVU5Hr1G081620.4	Barley	nucleus	62.82	64.34
TraesCS5B01G320500.1	Wheat	nucleus	61.39	63.82
TraesCS5D01G326200.3	Wheat	nucleus	57.91	58.75
CDY59590	Canola	nucleus	29.59	38.4
GSMUA_Achr9P24280_001	Banana	nucleus	40.35	38.17
Bra004507.1-P	Field mustard	nucleus	24.84	38.11
GSMUA_Achr4P04970_001	Banana	nucleus	39.08	37.88
CDY41558	Canola	nucleus	24.68	37.86
Bra029407.1-P	Field mustard	nucleus	29.91	37.13
CDY05436	Canola	nucleus	29.43	36.83
AT2G46790.1	Thale cress	nucleus	27.06	36.54
CDY19831	Canola	nucleus	28.32	36.02
Bra036517.1-P	Field mustard	nucleus	28.32	36.02
CDX80047	Canola	nucleus	22.15	35.26
CDX87123	Canola	nucleus	28.32	35.1
VIT_15s0048g02540.t01	Wine grape	nucleus	35.44	34.95
CDY48015	Canola	nucleus	25.16	34.49
AT5G24470.1	Thale cress	cytosol, nucleus, plastid	30.22	34.23
CDX80448	Canola	nucleus	29.59	33.57
Bra009768.1-P	Field mustard	nucleus	29.91	33.57
Solyc03g081240.2.1	Tomato	nucleus	35.13	32.65
VIT_16s0098g00900.t01	Wine grape	nucleus	35.28	32.41
GSMUA_Achr4P05170_001	Banana	nucleus	39.08	32.29
KRG97248	Soybean	nucleus	33.07	30.51
KRH64297	Soybean	nucleus	33.07	30.25
KRH68964	Soybean	nucleus	33.07	30.2
PGSC0003DMT400001574	Potato	nucleus	31.8	29.43
KRH47791	Soybean	nucleus	33.54	29.36
KRH53629	Soybean	nucleus	32.28	29.14
PGSC0003DMT400029402	Potato	nucleus	29.43	29.06
KRH06354	Soybean	nucleus	31.96	28.61
Solyc10g005030.2.1	Tomato	nucleus	28.8	28.22
CDX88107	Canola	plastid	29.91	27.16
Zm00001d004875_P002	Maize	nucleus	28.64	26.04
Zm00001d052781_P005	Maize	nucleus	27.85	25.36
Zm00001d047761_P005	Maize	nucleus	29.11	24.02
Zm00001d007240_P001	Maize	nucleus	22.31	23.82
Zm00001d017241_P002	Maize	nucleus	18.2	22.24
Zm00001d051114_P001	Maize	nucleus	18.51	21.43
CDY27522	Canola	nucleus	25.32	18.58
Bra040484.1-P	Field mustard	cytosol	22.15	16.99
Zm00001d003811_P001	Maize	cytosol	8.23	16.15
Zm00001d018818_P001	Maize	cytosol	7.44	15.46
Zm00001d043140_P001	Maize	cytosol	7.44	15.46
Zm00001d044406_P001	Maize	cytosol	7.28	15.13
Zm00001d005366_P001	Maize	cytosol	10.44	12.18

Protein Annotations

EntrezGene:100285170	MapMan:27.1.4	Gene3D:3.40.50.12740	UniProt:A0A1D6ETT5	InterPro:CCT_domain	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
InterPro:IPR001789	InterPro:IPR010402	ProteinID:ONM23089.1	PFAM:PF00072	PFAM:PF06203	PFscan:PS50110
PFscan:PS51017	PANTHER:PTHR43874	PANTHER:PTHR43874:SF11	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver
UniParc:UPI0004DEC61D	EnsemblPlantsGene:Zm00001d006212	EnsemblPlants:Zm00001d006212_P002	EnsemblPlants:Zm00001d006212_T002	SEG:seg	:

Description

Two-component response regulator-like APRR9

Coordinates

chr2:-:201957643..201963956

Molecular Weight (calculated)

70797.8 Da

IEP (calculated)

6.120

GRAVY (calculated)

-0.816

Length

632 amino acids

Sequence
(BLAST)

001: MGRGADEVVK VVDSEDGEGE EEEAEAAAAE GSSKETPMLP RMPVRVLLAE GDDSTRHVIS ALLRKCGYRV AAASDGVKAW DILKEKSFNI DLVLTEVELP
101: LMSGFLLLST IMEHDASKNI PVIMMSSHDS VSMVFKCMLK GASDFLVKPL RKNELRNLWQ HVWRKQLANG GPDVQHIQEE NLAERMEQKT GVTKDDNLNS
201: DGPCKNRECS EQESDAQSSC TRSELEAESK QTNNILEYMQ STERHLSIRS HKDLELNGET KTRTAKGNNL IPTREDDLLP KKRTCLNDNN SERTSRDMEL
301: VHIMDNQQKH DTQRDVDTMR TTSRRNDEKN SIPAHQLELS LRRTDYGKLE NHEKNDRRTL NHSTSSAFYL YNCRTASSLG NAGDGQLCST SETLVDVENR
401: NGDLAALSED TTETNRPPIR VVPFPVPVQC FTFDGQPFWN GTPVASPFYP QSAPPIWNSK TPTWQESTPQ ATSLPQKSQQ KEPVEMDAKP VENAEEQFVV
501: GPPSASGKQL HVEIPKDDLR HISPVTGESG ISTVLDSTRN TLSSSGCDST SNQITAPTEP SSNVYRGVPE TARAEGLRHL SQREAALNKF RLKRKDRCFE
601: KKVRYQSRKL LAEQRPRVKG QFVRQDHSIQ GS

Best Arabidopsis Sequence Match ( AT2G46790.1 )
(BLAST)

001: MGEIVVLSSD DGMETIKNRV KSSEVVQWEK YLPKTVLRVL LVESDYSTRQ IITALLRKCC YKVVAVSDGL AAWEVLKEKS HNIDLILTEL DLPSISGFAL
101: LALVMEHEAC KNIPVIMMSS QDSIKMVLKC MLRGAADYLI KPMRKNELKN LWQHVWRRLT LRDDPTAHAQ SLPASQHNLE DTDETCEDSR YHSDQGSGAQ
201: AINYNGHNKL MENGKSVDER DEFKETFDVT MDLIGGIDKR PDSIYKDKSR DECVGPELGL SLKRSCSVSF ENQDESKHQK LSLSDASAFS RFEESKSAEK
301: AVVALEESTS GEPKTPTESH EKLRKVTSDQ GSATTSSNQE NIGSSSVSFR NQVLQSTVTN QKQDSPIPVE SNREKAASKE VEAGSQSTNE GIAGQSSSTE
401: KPKEEESAKQ RWSRSQREAA LMKFRLKRKD RCFDKKVRYQ SRKKLAEQRP RVKGQFVRTV NSDASTKS

Arabidopsis Description

APRR9Two-component response regulator-like APRR9 [Source:UniProtKB/Swiss-Prot;Acc:Q8L500]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.