Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59590 | Canola | nucleus | 70.07 | 80.29 |
| Bra029407.1-P | Field mustard | nucleus | 72.76 | 79.76 |
| CDY05436 | Canola | nucleus | 71.86 | 79.41 |
| CDX87123 | Canola | nucleus | 72.4 | 79.22 |
| CDY19831 | Canola | nucleus | 69.89 | 78.47 |
| Bra036517.1-P | Field mustard | nucleus | 69.89 | 78.47 |
| CDX80448 | Canola | nucleus | 77.96 | 78.1 |
| Bra009768.1-P | Field mustard | nucleus | 78.49 | 77.8 |
| CDX88107 | Canola | plastid | 78.67 | 63.07 |
| VIT_16s0098g00900.t01 | Wine grape | nucleus | 47.31 | 38.37 |
| AT2G46790.1 | Thale cress | nucleus | 32.08 | 38.25 |
| Solyc03g081240.2.1 | Tomato | nucleus | 46.42 | 38.09 |
| KRH64297 | Soybean | nucleus | 46.24 | 37.34 |
| KRH53629 | Soybean | nucleus | 46.06 | 36.71 |
| PGSC0003DMT400001574 | Potato | nucleus | 42.65 | 34.85 |
| EER99234 | Sorghum | nucleus | 34.77 | 30.79 |
| Zm00001d006212_P002 | Maize | nucleus | 34.23 | 30.22 |
| HORVU5Hr1G081620.4 | Barley | nucleus | 33.33 | 30.15 |
| TraesCS5B01G320500.1 | Wheat | nucleus | 32.62 | 29.93 |
| Os09t0532400-01 | Rice | nucleus | 33.15 | 29.7 |
| TraesCS5A01G320300.1 | Wheat | nucleus | 32.26 | 29.65 |
| GSMUA_Achr9P24280_001 | Banana | nucleus | 34.59 | 28.89 |
| GSMUA_Achr4P04970_001 | Banana | nucleus | 33.15 | 28.37 |
| AT2G46670.1 | Thale cress | nucleus | 9.14 | 27.87 |
| AT5G60100.2 | Thale cress | nucleus | 25.99 | 27.78 |
| Zm00001d021291_P002 | Maize | mitochondrion, plastid | 33.69 | 27.69 |
| TraesCS5D01G326200.3 | Wheat | nucleus | 29.75 | 26.65 |
| Zm00001d016258_P001 | Maize | cytosol | 9.32 | 25.12 |
| GSMUA_Achr4P05170_001 | Banana | nucleus | 32.44 | 23.66 |
| AT5G02810.1 | Thale cress | nucleus | 27.96 | 21.46 |
| AT5G61380.1 | Thale cress | nucleus | 20.25 | 18.28 |
Protein Annotations
| MapMan:27.1.4 | Gene3D:3.40.50.12740 | EntrezGene:832518 | EMBL:AB046955 | ProteinID:AED93314.2 | Symbol:APRR5 |
| ArrayExpress:AT5G24470 | EnsemblPlantsGene:AT5G24470 | RefSeq:AT5G24470 | TAIR:AT5G24470 | RefSeq:AT5G24470-TAIR-G | EnsemblPlants:AT5G24470.1 |
| TAIR:AT5G24470.1 | EMBL:AY062114 | EMBL:AY143934 | ProteinID:BAB08930.1 | InterPro:CCT_domain | InterPro:CheY-like_superfamily |
| GO:GO:0000160 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0048511 |
| InterPro:IPR001789 | InterPro:IPR010402 | RefSeq:NP_568446.2 | PFAM:PF00072 | PFAM:PF06203 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50110 |
| PFscan:PS51017 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF4 | UniProt:Q6LA42 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI00000A6352 | SEG:seg | : | : | : |
Description
APRR5Two-component response regulator-like APRR5 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA42]
Coordinates
chr5:-:8356204..8358546
Molecular Weight (calculated)
62304.3 Da
IEP (calculated)
8.809
GRAVY (calculated)
-0.717
Length
558 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSEEVVEV TVVKAPEAGG GKLSRRKIRK KDAGVDGLVK WERFLPKIAL RVLLVEADDS TRQIIAALLR KCSYRVAAVP DGLKAWEMLK GKPESVDLIL
101: TEVDLPSISG YALLTLIMEH DICKNIPVIM MSTQDSVNTV YKCMLKGAAD YLVKPLRRNE LRNLWQHVWR RQTSLAPDSF PWNESVGQQK AEGASANNSN
201: GKRDDHVVSG NGGDAQSSCT RPEMEGESAD VEVSARDAVQ MECAKSQFNE TRLLANELQS KQAEAIDFMG ASFRRTGRRN REESVAQYES RIELDLSLRR
301: PNASENQSSG DRPSLHPSSA SAFTRYVHRP LQTQCSASPV VTDQRKNVAA SQDDNIVLMN QYNTSEPPPN APRRNDTSFY TGADSPGPPF SNQLNSWPGQ
401: SSYPTPTPIN NIQFRDPNTA YTSAMAPASL SPSPSSVSPH EYSSMFHPFN SKPEGLQDRD CSMDVDERRY VSSATEHSAI GNHIDQLIEK KNEDGYSLSV
501: GKIQQSLQRE AALTKFRMKR KDRCYEKKVR YESRKKLAEQ RPRIKGQFVR QVQSTQAP
101: TEVDLPSISG YALLTLIMEH DICKNIPVIM MSTQDSVNTV YKCMLKGAAD YLVKPLRRNE LRNLWQHVWR RQTSLAPDSF PWNESVGQQK AEGASANNSN
201: GKRDDHVVSG NGGDAQSSCT RPEMEGESAD VEVSARDAVQ MECAKSQFNE TRLLANELQS KQAEAIDFMG ASFRRTGRRN REESVAQYES RIELDLSLRR
301: PNASENQSSG DRPSLHPSSA SAFTRYVHRP LQTQCSASPV VTDQRKNVAA SQDDNIVLMN QYNTSEPPPN APRRNDTSFY TGADSPGPPF SNQLNSWPGQ
401: SSYPTPTPIN NIQFRDPNTA YTSAMAPASL SPSPSSVSPH EYSSMFHPFN SKPEGLQDRD CSMDVDERRY VSSATEHSAI GNHIDQLIEK KNEDGYSLSV
501: GKIQQSLQRE AALTKFRMKR KDRCYEKKVR YESRKKLAEQ RPRIKGQFVR QVQSTQAP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.