Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047761_P005 | Maize | nucleus | 91.11 | 90.99 |
| Os03t0284100-01 | Rice | nucleus | 72.29 | 74.23 |
| TraesCS4A01G105300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 61.05 | 70.12 |
| TraesCS4B01G198700.1 | Wheat | nucleus | 68.76 | 69.39 |
| HORVU4Hr1G057550.2 | Barley | nucleus | 68.63 | 69.17 |
| TraesCS4D01G199600.1 | Wheat | nucleus | 68.5 | 68.68 |
| OQU81435 | Sorghum | mitochondrion | 23.4 | 61.51 |
| GSMUA_Achr8P01990_001 | Banana | cytosol, nucleus, plastid | 46.93 | 48.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.1 | 48.04 |
| VIT_13s0067g03390.t01 | Wine grape | nucleus | 44.84 | 44.6 |
| GSMUA_Achr9P04240_001 | Banana | nucleus | 45.88 | 44.6 |
| CDX80201 | Canola | nucleus | 26.67 | 43.31 |
| CDY31578 | Canola | nucleus | 27.71 | 43.18 |
| Bra002512.1-P | Field mustard | nucleus | 26.54 | 41.94 |
| Solyc04g049670.2.1 | Tomato | nucleus | 34.64 | 41.86 |
| AT5G60100.2 | Thale cress | nucleus | 27.97 | 41.0 |
| EER99234 | Sorghum | nucleus | 24.18 | 29.37 |
| EES08014 | Sorghum | nucleus | 25.1 | 27.55 |
| EES05438 | Sorghum | nucleus | 15.82 | 23.09 |
Protein Annotations
| MapMan:27.1.4 | Gene3D:3.40.50.2300 | EntrezGene:8084889 | UniProt:C5WNM8 | InterPro:CCT_domain | InterPro:CheY-like_superfamily |
| EnsemblPlants:EER92434 | ProteinID:EER92434 | ProteinID:EER92434.1 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR001789 | InterPro:IPR010402 | PFAM:PF00072 |
| PFAM:PF06203 | PFscan:PS50110 | PFscan:PS51017 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF12 | SMART:SM00448 |
| EnsemblPlantsGene:SORBI_3001G411400 | SUPFAM:SSF52172 | unigene:Sbi.12562 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0001A82C18 | RefSeq:XP_002465436.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:69433370..69440372
Molecular Weight (calculated)
83600.4 Da
IEP (calculated)
6.425
GRAVY (calculated)
-0.880
Length
765 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSACQAGMD GPSRKDVLGI GNVALENGHH EVGADADEWR EKEEDLANGH SAPPGMQQVD EQEQQGQSIH WERFLPVKTL RVMLVENDDS TRQVVSALLR
101: KCCYEVIPAE NGSHAWRYLE DLQNNIDLVL TEVFMPCLSG IGLLSKITSH KICKDIPVIM MSSNDSMSMV FKCLSKGAVD FLVKPLRKNE LKNLWQHVWR
201: RCHSSSGSGS ESGIQTQKCA KPNTGDEYEN DSDSNHDDEE NDEDDDDDFS VGLNARDGSD NGSGTQSSWT KRAVEIDSPE PMSPDQLADP PDSTCAQVIH
301: PKSEICSNKW LPTANKRNGK KHKENKDESM GRYLEIGAPR NSSAEYQSSL NDVSVNPTEK RHETHMPQCK SKKKMMAEDD CTDIPSEINT ETADLISSIA
401: RNTEGQQAVR AVDAPDGPSK MPDGNDKNHD SHIVVTPHEL GLKRLRTDGA ADEIHDERNI LKRSDQSAFT RYHTSVASNQ GGARCGESSS PQDNSSEAVK
501: TDSTCKMKSN SDAAPIKQGS NGSSNNDVGS STKNVIAKPS ANRERVTSPS AIKSTQHASA FHTIQNQTSP ANLVGKDKAD EGISNAVKMS HPTEVPQSCV
601: QHHHHVHYYL HVMTQKQSSI DRGSSDVQCG SSNVFDPPVE GHAANYSVNG GVSVGHNGCN GQNGTSTVPN IARPNIESVN GTVSQNIAGG GIVSGSGSGN
701: DVYQNRFPQR EAALNKFRLK RKDRNFGKKV RYQSRKRLAE QRPRVRGQFV RQSGQEDQAA QGSER
101: KCCYEVIPAE NGSHAWRYLE DLQNNIDLVL TEVFMPCLSG IGLLSKITSH KICKDIPVIM MSSNDSMSMV FKCLSKGAVD FLVKPLRKNE LKNLWQHVWR
201: RCHSSSGSGS ESGIQTQKCA KPNTGDEYEN DSDSNHDDEE NDEDDDDDFS VGLNARDGSD NGSGTQSSWT KRAVEIDSPE PMSPDQLADP PDSTCAQVIH
301: PKSEICSNKW LPTANKRNGK KHKENKDESM GRYLEIGAPR NSSAEYQSSL NDVSVNPTEK RHETHMPQCK SKKKMMAEDD CTDIPSEINT ETADLISSIA
401: RNTEGQQAVR AVDAPDGPSK MPDGNDKNHD SHIVVTPHEL GLKRLRTDGA ADEIHDERNI LKRSDQSAFT RYHTSVASNQ GGARCGESSS PQDNSSEAVK
501: TDSTCKMKSN SDAAPIKQGS NGSSNNDVGS STKNVIAKPS ANRERVTSPS AIKSTQHASA FHTIQNQTSP ANLVGKDKAD EGISNAVKMS HPTEVPQSCV
601: QHHHHVHYYL HVMTQKQSSI DRGSSDVQCG SSNVFDPPVE GHAANYSVNG GVSVGHNGCN GQNGTSTVPN IARPNIESVN GTVSQNIAGG GIVSGSGSGN
701: DVYQNRFPQR EAALNKFRLK RKDRNFGKKV RYQSRKRLAE QRPRVRGQFV RQSGQEDQAA QGSER
001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
Arabidopsis Description
APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.