Factsheet for GSMUA_Achr9P04240_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	67.09	68.93
GSMUA_Achr8P01990_001	Banana	cytosol, nucleus, plastid	64.29	68.38
OQU81435	Sorghum	mitochondrion	20.08	54.3
VIT_13s0067g03390.t01	Wine grape	nucleus	49.68	50.85
Os07t0695100-01	Rice	nucleus	46.25	49.06
Zm00001d007240_P001	Maize	nucleus	36.59	48.65
CDY31578	Canola	nucleus	30.11	48.27
Bra002512.1-P	Field mustard	nucleus	29.61	48.14
Os03t0284100-01	Rice	nucleus	45.11	47.65
CDX80201	Canola	nucleus	28.46	47.56
TraesCSU01G199500.3	Wheat	nucleus	26.68	47.51
Solyc04g049670.2.1	Tomato	nucleus	38.12	47.39
EER92434	Sorghum	nucleus	44.6	45.88
TraesCS4B01G198700.1	Wheat	nucleus	44.09	45.78
TraesCS4A01G105300.1	Wheat	cytosol, mitochondrion, nucleus, plastid	38.63	45.65
HORVU4Hr1G057550.2	Barley	nucleus	43.84	45.45
Zm00001d047761_P005	Maize	nucleus	43.96	45.17
TraesCSU01G221500.1	Wheat	nucleus	25.16	44.9
TraesCS4D01G199600.1	Wheat	nucleus	43.33	44.69
AT5G60100.2	Thale cress	nucleus	29.61	44.64
TraesCSU01G196100.2	Wheat	nucleus	38.25	44.46
TraesCS2A01G081900.2	Wheat	nucleus	38.12	44.25
TraesCS2D01G079600.2	Wheat	nucleus	37.48	43.83
HORVU2Hr1G013400.34	Barley	cytosol, nucleus, plastid	37.87	43.13
GSMUA_Achr2P06760_001	Banana	nucleus	24.65	29.13
GSMUA_Achr9P08940_001	Banana	nucleus	24.14	28.88
GSMUA_Achr9P24280_001	Banana	nucleus	22.36	26.35
GSMUA_Achr4P04970_001	Banana	nucleus	20.97	25.31
GSMUA_Achr4P05170_001	Banana	nucleus	21.98	22.61
GSMUA_Achr9P19550_001	Banana	nucleus	14.74	22.01
GSMUA_Achr10P...	Banana	nucleus	14.87	21.59
GSMUA_Achr2P04570_001	Banana	nucleus	13.85	19.85

Protein Annotations

MapMan:27.1.4	Gene3D:3.40.50.2300	InterPro:CCT_domain	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr9G04240_001	EnsemblPlants:GSMUA_Achr9P04240_001
EnsemblPlants:GSMUA_Achr9T04240_001	InterPro:IPR001789	InterPro:IPR010402	UniProt:M0TXD3	PFAM:PF00072	PFAM:PF06203
PFscan:PS50110	PFscan:PS51017	PANTHER:PTHR43874	PANTHER:PTHR43874:SF12	SMART:SM00448	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000296BAB3	SEG:seg	:	:	:

Description

Two-component response regulator-like PRR73 [Source:GMGC_GENE;Acc:GSMUA_Achr9G04240_001]

Coordinates

chr9:-:2843475..2849710

Molecular Weight (calculated)

85868.4 Da

IEP (calculated)

7.871

GRAVY (calculated)

-0.881

Length

787 amino acids

Sequence
(BLAST)

001: MRNVFLWDNR VMESAHQAGP KGATNEGLTD GNHQDETEHK EAPCSGEGHA PSEEDESKIN VALEDLNGNQ ITDATPLAKQ TAGLQKQEQQ PPGPIVRWER
101: FLPVRTLKVL LVENDDSTRQ VVSALLRNCS YEVTAVANGL QAWKILEHLT NHVDLVLTEV VMPGLNGVGL LSKIMNHKTR KNVPVIMMSS SDSMGTVFKC
201: LSKGAVDFLV KPIRKNELKN LWQHVWRRCH SSSGSGSGSE SGIQTQKSVK SKSSDDTDNS SSSNDHDNES IDLNARDGSD HGSRTQSSWT KCAPETDSPQ
301: PMSPLDQLAD PPDSTCAQVI RPTPETFSKD QMPTSAIREN HGKKKPSDDC MGKKMKIQEC RKPEMQYESH STEQDFIKLA DKKMDKLPEK DSKNKGHLGT
401: FRNDSFNDPN AQAANLIDAV ANSSDSRVVT RIAQAPSGFS KVVEEQDKIN HTSIDLPSVE LSLKRLRSIG ESGTANQDDR NVLRRLELSA FSRYHTSATS
501: NQAPTGCGGS CSPLDTSSEA IKTESMHNIV SSSDAGHPKQ GSNGSNDNDM GSTTKNALTQ QAAHKTKTAA FTSTVKCNQS TALHPVQYQA SESQEPVQDN
601: VETVTAASAT NQPRKFQHQQ HRQQPSPNHN DLSLKNKAGA THQCGSFNVF NGHVEGNAAN YSINGSNSGS NYCSNRQDGS SNAIQTGGLN MESANGLTEQ
701: CGPGSGNGSG RGGACGVDQN RLAQREAALK KFRQKRKERN FRKKVRYQSR KKLADQRPRV RGQFVWQSVH EQTGRAADTE DPHGLVA

Best Arabidopsis Sequence Match ( AT5G02810.1 )
(BLAST)

001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS

Arabidopsis Description

APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.