Factsheet for TraesCS2D01G079600.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G199500.3	Wheat	nucleus	62.7	95.48
TraesCS2A01G081900.2	Wheat	nucleus	94.95	94.25
TraesCSU01G196100.2	Wheat	nucleus	94.35	93.8
TraesCSU01G221500.1	Wheat	nucleus	58.84	89.8
HORVU2Hr1G013400.34	Barley	cytosol, nucleus, plastid	90.49	88.13
Os07t0695100-01	Rice	nucleus	67.76	61.46
Zm00001d007240_P001	Maize	nucleus	51.11	58.11
OQU81435	Sorghum	mitochondrion	24.37	56.36
TraesCS4D01G199600.1	Wheat	nucleus	53.49	47.18
GSMUA_Achr8P01990_001	Banana	cytosol, nucleus, plastid	44.87	40.81
GSMUA_AchrUn_...	Banana	nucleus	46.36	40.73
Solyc04g049670.2.1	Tomato	nucleus	36.85	39.18
CDX80201	Canola	nucleus	27.04	38.64
VIT_13s0067g03390.t01	Wine grape	nucleus	44.13	38.62
CDY31578	Canola	nucleus	28.08	38.49
Bra002512.1-P	Field mustard	nucleus	27.34	38.02
GSMUA_Achr9P04240_001	Banana	nucleus	43.83	37.48
AT5G60100.2	Thale cress	nucleus	28.53	36.78
TraesCS4D01G112800.1	Wheat	nucleus	26.3	25.58
TraesCS5D01G326200.3	Wheat	nucleus	21.25	22.95
TraesCS6D01G207100.2	Wheat	endoplasmic reticulum, nucleus, plastid	16.34	19.43

Protein Annotations

MapMan:27.1.4	Gene3D:3.40.50.2300	InterPro:CCT_domain	InterPro:CheY-like_superfamily	GO:GO:0000003	GO:GO:0000160
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0009628
GO:GO:0009791	GO:GO:0009987	GO:GO:0048579	InterPro:IPR001789	InterPro:IPR010402	PFAM:PF00072
PFAM:PF06203	PFscan:PS50110	PFscan:PS51017	PANTHER:PTHR43874	PANTHER:PTHR43874:SF12	SMART:SM00448
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	EnsemblPlantsGene:TraesCS2D01G079600	EnsemblPlants:TraesCS2D01G079600.2	TIGR:cd00156	SEG:seg

Description

No Description!

Coordinates

chr2D:-:33952488..33955668

Molecular Weight (calculated)

72400.8 Da

IEP (calculated)

8.811

GRAVY (calculated)

-0.861

Length

673 amino acids

Sequence
(BLAST)

001: MFPLGARPPP PSAMDRHHHQ QPPSPQGEHA AQPRCWEEFL HRKTIRVLLV ETDDSTRQVV TALLRHCMYQ VIPAENGHQA WAYLQDMQSN IDLVLTEVFM
101: HGGLSGIDLL GRIMNHEVCK DIPVIMMSSH DSMGTVLSCL SNGAADFLAK PIRKNELKNL WAHVWRRSHS SSGSGSGSAI QTQKCTKSKS GDDSNNNSNN
201: RNDDASMGLN ARDGSDNGSG TQSSWTKRAV EIDSPQDMSP DQSVDPPDST CAHVSHLKSE ICSNRLRGTN NKKCQKPKET NAEFKGKELE IGAPGNLNTE
301: DQSSPNESSV KPADNGRCEY LPQNNSNDTV MENSDEPIVR AADLIGSMAK NMDAQQAARA IDAPNCSSQA PQGKDTDREN AMPYLELSLK RSRSTADGAD
401: AAIQEEQRNV VRRSDLSAFT RYNTCAVSNQ GGAGFVGSCS PNGNSSEAAK TDAAQMKQGS NGSSNNNDMG STTKSVVTKP AGGNNKVSPI NGNTHTSAFH
501: RVQPWTPATA AGKDKADEMS KKNAATAAAA KDNGGEAQSK RPCAAAHDTN GGSSAGGTAQ SNVVNPSGPV EGHAANYGSN SGSNNNTNNG STAATAAAAV
601: HAETGGIDKR SNMMHMKRER RVAAVNKFRE KRKERNFGKK VRYQSRKRLA EQRPRVRGQF VRLPLRDNLP PHT

Best Arabidopsis Sequence Match ( AT5G02810.1 )
(BLAST)

001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS

Arabidopsis Description

APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.