Factsheet for Bra002512.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31578	Canola	nucleus	92.56	91.24
Bra020263.1-P	Field mustard	nucleus	18.59	73.17
AT5G60100.2	Thale cress	nucleus	78.31	72.61
OQU81435	Sorghum	mitochondrion	24.38	40.55
Bra004507.1-P	Field mustard	nucleus	31.2	36.65
TraesCSU01G199500.3	Wheat	nucleus	30.58	33.48
GSMUA_Achr8P01990_001	Banana	cytosol, nucleus, plastid	48.35	31.62
Bra009565.1-P	Field mustard	nucleus	45.87	31.53
TraesCSU01G221500.1	Wheat	nucleus	28.31	31.07
GSMUA_AchrUn_...	Banana	nucleus	48.35	30.55
VIT_13s0067g03390.t01	Wine grape	nucleus	48.35	30.43
GSMUA_Achr9P04240_001	Banana	nucleus	48.14	29.61
Bra028861.1-P	Field mustard	nucleus	38.43	29.15
TraesCS4B01G198700.1	Wheat	nucleus	43.59	27.84
Bra036517.1-P	Field mustard	nucleus	28.51	27.77
Solyc04g049670.2.1	Tomato	nucleus	36.16	27.65
TraesCS2A01G081900.2	Wheat	nucleus	38.64	27.58
Os07t0695100-01	Rice	nucleus	42.15	27.49
TraesCS2D01G079600.2	Wheat	nucleus	38.02	27.34
TraesCS4A01G105300.1	Wheat	cytosol, mitochondrion, nucleus, plastid	37.6	27.33
HORVU4Hr1G057550.2	Barley	nucleus	42.77	27.27
TraesCSU01G196100.2	Wheat	nucleus	38.02	27.18
TraesCS4D01G199600.1	Wheat	nucleus	42.77	27.13
Bra029407.1-P	Field mustard	nucleus	28.51	27.11
Os03t0284100-01	Rice	nucleus	41.32	26.85
HORVU2Hr1G013400.34	Barley	cytosol, nucleus, plastid	38.02	26.63
EER92434	Sorghum	nucleus	41.94	26.54
Zm00001d047761_P005	Maize	nucleus	41.74	26.37
Bra009768.1-P	Field mustard	nucleus	30.37	26.11
Zm00001d007240_P001	Maize	nucleus	31.61	25.84
Bra035933.1-P	Field mustard	nucleus	21.28	20.24
Bra012964.1-P	Field mustard	nucleus	21.07	17.71
Bra040484.1-P	Field mustard	cytosol	27.69	16.26

Protein Annotations

MapMan:27.1.4	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra002512	EnsemblPlants:Bra002512.1	EnsemblPlants:Bra002512.1-P	InterPro:CCT_domain
InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0032091	GO:GO:0042752	InterPro:IPR001789	InterPro:IPR010402	UniProt:M4CE81
PFAM:PF00072	PFAM:PF06203	PFscan:PS50110	PFscan:PS51017	PANTHER:PTHR43874	PANTHER:PTHR43874:SF34
SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0002543EC8	SEG:seg	:

Description

AT5G60100 (E=2e-101) APRR3, PRR3 | APRR3 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator

Coordinates

chrA10:-:9126428..9128628

Molecular Weight (calculated)

53049.4 Da

IEP (calculated)

6.048

GRAVY (calculated)

-0.824

Length

484 amino acids

Sequence
(BLAST)

001: MCFNKNDITN EVVTERQAFG SSEEDDSRVE DTAGNANNLL QITQQQQPSA PVVNWERYLP VRSLKVLLVE NDDSTRHIVT ALLKNCSYEV TAVPDVLEAW
101: KVLEDENSCI DLVLTEVVMP VNSGTGLLSK IMSHQTLKNI PVIMMSSHDS MVLVFKCLSN GAVDFLVKPI RKNELKNLWQ HVWRRCHSSS GSGSESGIHN
201: KKSVKTESTD EGSEDDASMS DEDNGNDDNG SNGLSNGEGG SDHGSGTQSS WTKRASDVNV GTYGNECERL KKLKEVEDEN GQIGMGSQAG QCMSKKAVIA
301: LERNNDDLLN RSSGNSQVET KTPSSNPEDL QSLELTFTKP KEAGDQRVGG DRSVLRHSNH SAFSKYNNGA TSANKAPEEN VGSCSPQDSS VAKIIGSSSS
401: SDNPSNQQSS GSDRAAQREA ALMKFRLKRK ERCFEKKVRY HSRKKLAEQR PRIKGQFIRK MDASKSGNEC QSSDDSSSKI GKED

Best Arabidopsis Sequence Match ( AT5G60100.5 )
(BLAST)

001: MCFNNIETGD EVETERQVFG SSEEDEFRVE DTARNTNNVQ ISQQQQQPLA HVVKWERYLP VRSLKVLLVE NDDSTRHIVT ALLKNCSYEV TAVPDVLEAW
101: RILEDEKSCI DLVLTEVDMP VHSGTGLLSK IMSHKTLKNI PVIMMSSHDS MVLVFKCLSN GAVDFLVKPI RKNELKNLWQ HVWRRCHSSS GSGSESGIHD
201: KKSVKPESTQ GSENDASISD EHRNESGSSG GLSNQDGGSD NGSGTQSSWT KRASDTKSTS PSNQFPDAPN KKGTYENGCA HVNRLKEAED QKEQIGTGSQ
301: TGMSMSKKAE EPGDLEKNAK YSVQALERNN DDTLNRSSGN SQVESKAPSS NREDLQSLEQ TLKKTREDRD YKVGDRSVLR HSNLSAFSKY NNGATSAKKA
401: PEENVESCSP HDSPIAKLLG SSSSSDNPLK QQSSGSDRWA QREAALMKFR LKRKERCFEK KVRYHSRKKL AEQRPHVKGQ FIRKRDDHKS GSEDN

Arabidopsis Description

PRR3Pseudo-response regulator 3 [Source:UniProtKB/TrEMBL;Acc:F4JXG7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.