Factsheet for Solyc04g049670.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g03390.t01	Wine grape	nucleus	54.66	44.99
Zm00001d007240_P001	Maize	nucleus	41.07	43.92
GSMUA_AchrUn_...	Banana	nucleus	51.18	42.3
GSMUA_Achr8P01990_001	Banana	cytosol, nucleus, plastid	48.03	41.08
Os07t0695100-01	Rice	nucleus	47.08	40.16
TraesCS4A01G105300.1	Wheat	cytosol, mitochondrion, nucleus, plastid	42.02	39.94
GSMUA_Achr9P04240_001	Banana	nucleus	47.39	38.12
OQU81435	Sorghum	mitochondrion	17.22	37.46
CDX80201	Canola	nucleus	27.49	36.94
TraesCS2A01G081900.2	Wheat	nucleus	39.49	36.87
TraesCS2D01G079600.2	Wheat	nucleus	39.18	36.85
TraesCSU01G196100.2	Wheat	nucleus	39.18	36.63
CDY31578	Canola	nucleus	28.12	36.25
Bra002512.1-P	Field mustard	nucleus	27.65	36.16
HORVU2Hr1G013400.34	Barley	cytosol, nucleus, plastid	39.02	35.75
TraesCSU01G199500.3	Wheat	nucleus	24.49	35.07
TraesCS4B01G198700.1	Wheat	nucleus	41.86	34.96
AT5G60100.2	Thale cress	nucleus	28.59	34.67
EER92434	Sorghum	nucleus	41.86	34.64
Os03t0284100-01	Rice	nucleus	40.76	34.63
HORVU4Hr1G057550.2	Barley	nucleus	41.39	34.52
TraesCS4D01G199600.1	Wheat	nucleus	41.39	34.34
Zm00001d047761_P005	Maize	nucleus	41.39	34.2
Solyc10g086000.1.1	Tomato	nucleus	36.97	32.05
TraesCSU01G221500.1	Wheat	nucleus	21.96	31.52
Solyc03g081270.1.1	Tomato	plastid	9.48	23.62
Solyc10g005030.2.1	Tomato	nucleus	21.96	21.55
Solyc06g069690.2.1	Tomato	nucleus	16.75	21.12
Solyc03g081240.2.1	Tomato	nucleus	22.27	20.74
Solyc03g115770.2.1	Tomato	nucleus	17.69	20.29

Protein Annotations

MapMan:27.1.4	Gene3D:3.40.50.2300	InterPro:CCT_domain	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	InterPro:IPR010402
UniProt:K4BRU3	PFAM:PF00072	PFAM:PF06203	PFscan:PS50110	PFscan:PS51017	PANTHER:PTHR43874
PANTHER:PTHR43874:SF34	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	EnsemblPlantsGene:Solyc04g049670.2	EnsemblPlants:Solyc04g049670.2.1	UniParc:UPI000276681E
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:42849588..42856249

Molecular Weight (calculated)

68613.4 Da

IEP (calculated)

7.674

GRAVY (calculated)

-0.836

Length

633 amino acids

Sequence
(BLAST)

001: MPFLSGVGLL SKIMNHKTLK NVPVIMMSAN DSMGIVFKCL SKGAVDFLVK PIRKNELKNL WQHVWRKCHS SSGSGSESGI QTQKSTKSKS VEMSGNNTDS
101: NDEAENGSFD LDDRDGSDNG SGTQSSWSKR AIEVDSPQPM SPWNELADPP DSTCAQVIHS RPEALSATWV PANATRRCLN EKDELGNVRT VKDLNMGVAN
201: VPELEGLSGK VMDGLAASMK DKHLELDPKD NENMGRNLKL NKETREDDLK DKDVGYMGDI TNTCTPQVES TANEVPNDPS KITNIKEIAT YDSKDMPSLE
301: LSLKQLRDVG ENGTGVQERN ILRHSDLSAF SRYNAASTAN QAPTGNVGSC SPVNNSSEVA KAESIHNLQS KSSSTPNQRS NGSSNNNDMG SSTNNFFIKP
401: DTLIDKPINK PAVNAHSCSA FQPVQHGHTS SLQAMVPGTQ DTAKAAVGQA RAMHQKFQVQ HHHHHYHHHH HHVLSLQQRQ QLLNADASSL RNAVETAPDC
501: GTSDMVGTPV EGNAANYGSA SGSNNGSNGQ NGSSGQNGSS TAVVAEGTNL VAENETGEKC EIGSGSGSAT RSGDHSAQRE AALIKFRQKR KERCFEKKVR
601: YQSRKRLAEQ RPRMRGQFVR QDADKSKSNN TNS

Best Arabidopsis Sequence Match ( AT5G02810.1 )
(BLAST)

001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS

Arabidopsis Description

APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.