Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G021000.7 | Barley | cytosol, nucleus | 84.17 | 93.55 |
| TraesCS4D01G112800.1 | Wheat | nucleus | 96.87 | 89.31 |
| TraesCS4B01G115100.1 | Wheat | nucleus | 96.71 | 89.16 |
| Os11t0157600-01 | Rice | cytosol, nucleus | 71.63 | 65.57 |
| EES08014 | Sorghum | nucleus | 65.36 | 59.83 |
| Zm00001d052781_P005 | Maize | nucleus | 63.48 | 58.36 |
| Zm00001d004875_P002 | Maize | nucleus | 61.6 | 56.55 |
| GSMUA_Achr2P06760_001 | Banana | nucleus | 39.97 | 38.29 |
| GSMUA_Achr9P08940_001 | Banana | nucleus | 31.03 | 30.09 |
| TraesCS5A01G320300.1 | Wheat | nucleus | 22.57 | 23.72 |
| TraesCS2A01G081900.2 | Wheat | nucleus | 22.73 | 21.39 |
| TraesCS4A01G105300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 19.91 | 19.07 |
| TraesCS6A01G227900.2 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 15.05 | 17.08 |
Protein Annotations
| Gene3D:3.40.50.2300 | MapMan:35.1 | InterPro:CCT_domain | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:IPR001789 | InterPro:IPR010402 | PFAM:PF06203 | PFscan:PS50110 | PFscan:PS51017 | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF4 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:TraesCS4A01G200200 | EnsemblPlants:TraesCS4A01G200200.1 | SEG:seg |
Description
No Description!
Coordinates
chr4A:+:488528980..488534766
Molecular Weight (calculated)
69853.7 Da
IEP (calculated)
8.776
GRAVY (calculated)
-0.770
Length
638 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPDADAGEP AAAAAGPGGG AARGVIRWDE ILPRRSLRVL LVEHDDSTRQ VVTALLRKCG YRVMSSQDSI GTVLKCMQNG AVDFLVKPVR KNELRNLWQH
101: VWRRHSMNSQ LNASENNAAS NHISVNSGTG SKTGENSDEK SDAQSSGSKR ETDIQSVEKL PEIVAHNGAS SCRELKIQNG PFDRMNTKAL ALKGTDDAPS
201: GNACGTSKQQ VFSAEKNVCS KYLHGITSAK VAGQIMDNAM RIADASSCRP SDPGKDLMAT GQPTTSKKCK SPVTKNNAVK PVMENTLHEN SKGAAIGHPQ
301: PCPSHLLDVN LGKQQRSDGH VNQELRDKDN FNHSNSSAFS RYGNKRIEPS AKQLSLPSVH LTYQESVYDK NVQSSGALPS HEHHTCKITM QAQAPLDSCT
401: VGPAIPSSSS AREDAGTISS SPRKDNFGHP PYGFIPVPIS VAAAIPYQYS AIMPPIYYTQ PPFMQCDPSG INQMGIQHAY HSSYHQNLGK PSEIDEHRQL
501: EENQRLHHSK QILQESGEPI DLLRAHAERN NQSASCSQDI RGWTVSGETD TNTNAIIAPE SGNESGIQNF GYNGLDSDRS RREAALMKFR MKRKDRCFEK
601: KVRYHSRKKL AEQRPRIKGQ FVSQKLKSAT TTEDAETD
101: VWRRHSMNSQ LNASENNAAS NHISVNSGTG SKTGENSDEK SDAQSSGSKR ETDIQSVEKL PEIVAHNGAS SCRELKIQNG PFDRMNTKAL ALKGTDDAPS
201: GNACGTSKQQ VFSAEKNVCS KYLHGITSAK VAGQIMDNAM RIADASSCRP SDPGKDLMAT GQPTTSKKCK SPVTKNNAVK PVMENTLHEN SKGAAIGHPQ
301: PCPSHLLDVN LGKQQRSDGH VNQELRDKDN FNHSNSSAFS RYGNKRIEPS AKQLSLPSVH LTYQESVYDK NVQSSGALPS HEHHTCKITM QAQAPLDSCT
401: VGPAIPSSSS AREDAGTISS SPRKDNFGHP PYGFIPVPIS VAAAIPYQYS AIMPPIYYTQ PPFMQCDPSG INQMGIQHAY HSSYHQNLGK PSEIDEHRQL
501: EENQRLHHSK QILQESGEPI DLLRAHAERN NQSASCSQDI RGWTVSGETD TNTNAIIAPE SGNESGIQNF GYNGLDSDRS RREAALMKFR MKRKDRCFEK
601: KVRYHSRKKL AEQRPRIKGQ FVSQKLKSAT TTEDAETD
001: MTSSEEVVEV TVVKAPEAGG GKLSRRKIRK KDAGVDGLVK WERFLPKIAL RVLLVEADDS TRQIIAALLR KCSYRVAAVP DGLKAWEMLK GKPESVDLIL
101: TEVDLPSISG YALLTLIMEH DICKNIPVIM MSTQDSVNTV YKCMLKGAAD YLVKPLRRNE LRNLWQHVWR RQTSLAPDSF PWNESVGQQK AEGASANNSN
201: GKRDDHVVSG NGGDAQSSCT RPEMEGESAD VEVSARDAVQ MECAKSQFNE TRLLANELQS KQAEAIDFMG ASFRRTGRRN REESVAQYES RIELDLSLRR
301: PNASENQSSG DRPSLHPSSA SAFTRYVHRP LQTQCSASPV VTDQRKNVAA SQDDNIVLMN QYNTSEPPPN APRRNDTSFY TGADSPGPPF SNQLNSWPGQ
401: SSYPTPTPIN NIQFRDPNTA YTSAMAPASL SPSPSSVSPH EYSSMFHPFN SKPEGLQDRD CSMDVDERRY VSSATEHSAI GNHIDQLIEK KNEDGYSLSV
501: GKIQQSLQRE AALTKFRMKR KDRCYEKKVR YESRKKLAEQ RPRIKGQFVR QVQSTQAP
101: TEVDLPSISG YALLTLIMEH DICKNIPVIM MSTQDSVNTV YKCMLKGAAD YLVKPLRRNE LRNLWQHVWR RQTSLAPDSF PWNESVGQQK AEGASANNSN
201: GKRDDHVVSG NGGDAQSSCT RPEMEGESAD VEVSARDAVQ MECAKSQFNE TRLLANELQS KQAEAIDFMG ASFRRTGRRN REESVAQYES RIELDLSLRR
301: PNASENQSSG DRPSLHPSSA SAFTRYVHRP LQTQCSASPV VTDQRKNVAA SQDDNIVLMN QYNTSEPPPN APRRNDTSFY TGADSPGPPF SNQLNSWPGQ
401: SSYPTPTPIN NIQFRDPNTA YTSAMAPASL SPSPSSVSPH EYSSMFHPFN SKPEGLQDRD CSMDVDERRY VSSATEHSAI GNHIDQLIEK KNEDGYSLSV
501: GKIQQSLQRE AALTKFRMKR KDRCYEKKVR YESRKKLAEQ RPRIKGQFVR QVQSTQAP
Arabidopsis Description
APRR5Two-component response regulator-like APRR5 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA42]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.