Factsheet for HORVU4Hr1G021000.7

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G200200.1	Wheat	nucleus	93.55	84.17
TraesCS4D01G112800.1	Wheat	nucleus	93.73	77.75
TraesCS4B01G115100.1	Wheat	nucleus	93.55	77.6
Os11t0157600-01	Rice	cytosol, nucleus	71.43	58.82
EES08014	Sorghum	nucleus	65.33	53.8
Zm00001d052781_P005	Maize	nucleus	63.59	52.59
Zm00001d004875_P002	Maize	nucleus	61.32	50.65
GSMUA_Achr2P06760_001	Banana	nucleus	38.68	33.33
GSMUA_Achr9P08940_001	Banana	nucleus	29.62	25.84
HORVU5Hr1G081620.4	Barley	nucleus	21.25	19.77
HORVU2Hr1G013400.34	Barley	cytosol, nucleus, plastid	21.78	18.09
HORVU6Hr1G057630.1	Barley	nucleus	15.16	16.67
HORVU4Hr1G057550.2	Barley	nucleus	21.6	16.34

Protein Annotations

Gene3D:3.40.50.2300	MapMan:35.1	UniProt:A0A287NHT4	InterPro:CCT_domain	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G021000
EnsemblPlants:HORVU4Hr1G021000.7	InterPro:IPR001789	InterPro:IPR010402	PFAM:PF06203	PFscan:PS50110	PFscan:PS51017
PANTHER:PTHR43874	PANTHER:PTHR43874:SF4	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000B463CB5	SEG:seg

Description

No Description!

Coordinates

chrchr4H:-:105913646..105916694

Molecular Weight (calculated)

63349.8 Da

IEP (calculated)

8.474

GRAVY (calculated)

-0.867

Length

574 amino acids

Sequence
(BLAST)

001: EHLLVMSSQD SIGTVLKCMQ NGAVDFLVKP VRKNELRNLW QHVWRRHSMN SQLNASENNA ASNHISVNSG TGSKTGENSD EESDAQSSGS KRETEIQSVE
101: KLPETVTHNV ASSPRELKVQ NGPFDRMNTK APALKGTDDA PSGNACGASK PQVFSAEKNV RSKYLHGITS AKVAGQIMDN AMRIADASSC RPSDLGKDLM
201: ATAQPTTSKK CKSPITMNNA VKPVMKNTLR EDSKGTAIDH PSLDVNLGKQ QRSDGHVNQE LRDKDNFNHS NSSAFSRYGN KRIEPSAKQL SLPSVHLTYQ
301: ESVNDKNVQS SGVLPSHEHH TCKITMQAQA PLDSCTEGPA IPSSTSARED AGTSSSSPRK DNFGHPPYGF IPVPIPVGAA IPYHYSAIMP PIYYTQPPFM
401: QCDPSGINQM GIQHAYHSSY HQNLSKPSEI DEHRQLEENQ RLHHSRQILQ ESGEPIDLLR AHAEHNNQSA SCSQDIRGWT VSGETDTNTN TVIAPESGNE
501: SGIQNFGYNG LDSDRSRREA ALMKFRMKRK DRCFEKKVRY HSRKKLAEQR PRIKGQFVSQ KLKSATTTED AETD

Best Arabidopsis Sequence Match ( AT2G46670.1 )
(BLAST)

001: MYLTCRFEES KSAEKAVVAL EESTSGEPKT PTESHEKLRK VRSDQGSSTT SSNQENIGSS SVSFRNQVLQ STVTNQKQDS PIPVESNREK AASKEVEAGS
101: QSTNEGIAGQ SSSTEKPKEE ESAKQRWSRS QREAALMKFR LKRKDRCFDK KVRYQSRKKL AEQRPRVKGQ FVRTVNSDAS TKS

Arabidopsis Description

CCT motif family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV91]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.