Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70344 | Canola | nucleus | 97.0 | 96.59 |
| CDY55688 | Canola | nucleus | 83.17 | 84.62 |
| CDY04868 | Canola | nucleus | 82.74 | 83.69 |
| AT5G02810.1 | Thale cress | nucleus | 85.88 | 82.81 |
| VIT_08s0040g03120.t01 | Wine grape | nucleus | 15.83 | 52.61 |
| KRH32378 | Soybean | nucleus | 51.36 | 47.81 |
| KRH19783 | Soybean | nucleus | 50.78 | 47.15 |
| CDX80201 | Canola | nucleus | 30.67 | 45.65 |
| CDY31578 | Canola | nucleus | 31.67 | 45.21 |
| CDY09224 | Canola | nucleus | 8.13 | 44.53 |
| Solyc10g086000.1.1 | Tomato | nucleus | 39.09 | 37.53 |
| CDY41558 | Canola | nucleus | 21.4 | 36.41 |
| CDY48015 | Canola | nucleus | 21.54 | 32.75 |
| CDX80047 | Canola | nucleus | 18.4 | 32.49 |
| CDY59590 | Canola | nucleus | 21.97 | 31.62 |
| CDY19831 | Canola | nucleus | 21.54 | 30.38 |
| CDY05436 | Canola | nucleus | 21.54 | 29.9 |
| CDX87123 | Canola | nucleus | 21.68 | 29.8 |
| CDX80448 | Canola | nucleus | 22.82 | 28.73 |
| CDX87210 | Canola | nucleus | 16.41 | 22.95 |
| CDX88107 | Canola | plastid | 22.68 | 22.84 |
| CDY02151 | Canola | nucleus | 16.69 | 21.39 |
| CDY64140 | Canola | nucleus | 16.69 | 20.42 |
| CDY27522 | Canola | nucleus | 21.83 | 17.77 |
Protein Annotations
| MapMan:27.1.4 | Gene3D:3.40.50.2300 | GO:A0A078FBP6 | UniProt:A0A078FBP6 | InterPro:CCT_domain | EnsemblPlants:CDY10422 |
| ProteinID:CDY10422 | ProteinID:CDY10422.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00032340001 | InterPro:IPR001789 | InterPro:IPR010402 |
| PFAM:PF00072 | PFAM:PF06203 | PFscan:PS50110 | PFscan:PS51017 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF34 |
| SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0004EB4057 | SEG:seg | : |
Description
BnaCnng03230DBnaCnng03230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBP6]
Coordinates
chrLK032003:+:392850..396770
Molecular Weight (calculated)
76354.3 Da
IEP (calculated)
7.267
GRAVY (calculated)
-0.858
Length
701 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVNEEGEGS RYPVTDQKPV ETKERLSGED KANGIVMDVR NGSAVGSGGL QIPISQQTPA TVCWERFLHV RTIRVLLVEN DDCTRYIVTA LLRNCSYEVV
101: EVANGVQAWK VLEDLNNHID IVLTEVVMPY LSGIGLLCKI LNHKSRRNIP VIMMSSHDSM GLVFKCLSKG AVDFLVKPIR KNELKILWQH VWRRCQSSSG
201: SGSESGTHQT QKSVKSKNVI KSDNDSGRSG ENENESDGLN ASDGSSDGSG AQSSWTKKAV EVDDDSPRAV SPWDRVDSTC AQVVHSNPEV PGNHLIAAPA
301: EKETQEQDEK FEDITMGRDL EISIHGNCDL TLEPKDEPLT KSTGVGKGPL DLNSESRSSK QMHEDGGSGF KAISSHLQDN REHEAPNTHC KTVDTNEAAI
401: KNPEEPMHVE HSSKRHRGAK DDETIVRDDR NVLRRSEGSA FSRYNPALNN SKLSGGNLGS NSRHDNNCQD LNKRTEAACD CHSNMNESLP SNHHSRVGSN
501: NVEMSSTTVN NAFTKPGAPK VSPAGSSSAK RSLFQPLPCD HHHSSHNLVH VPERKLPPQY GSSNVYNETV EGNNNNTVNY SVNGSGSGSG HGSNDPYGSS
601: NGMNAGGLNM GSENGAGKSG SGDGSGSGSG SGNVADENKI SQREAALTKF RQKRKERCFR KKVRYQSRKK LAEQRPRVRG QFVRKTAAAT DDNDIKTPRD
701: S
101: EVANGVQAWK VLEDLNNHID IVLTEVVMPY LSGIGLLCKI LNHKSRRNIP VIMMSSHDSM GLVFKCLSKG AVDFLVKPIR KNELKILWQH VWRRCQSSSG
201: SGSESGTHQT QKSVKSKNVI KSDNDSGRSG ENENESDGLN ASDGSSDGSG AQSSWTKKAV EVDDDSPRAV SPWDRVDSTC AQVVHSNPEV PGNHLIAAPA
301: EKETQEQDEK FEDITMGRDL EISIHGNCDL TLEPKDEPLT KSTGVGKGPL DLNSESRSSK QMHEDGGSGF KAISSHLQDN REHEAPNTHC KTVDTNEAAI
401: KNPEEPMHVE HSSKRHRGAK DDETIVRDDR NVLRRSEGSA FSRYNPALNN SKLSGGNLGS NSRHDNNCQD LNKRTEAACD CHSNMNESLP SNHHSRVGSN
501: NVEMSSTTVN NAFTKPGAPK VSPAGSSSAK RSLFQPLPCD HHHSSHNLVH VPERKLPPQY GSSNVYNETV EGNNNNTVNY SVNGSGSGSG HGSNDPYGSS
601: NGMNAGGLNM GSENGAGKSG SGDGSGSGSG SGNVADENKI SQREAALTKF RQKRKERCFR KKVRYQSRKK LAEQRPRVRG QFVRKTAAAT DDNDIKTPRD
701: S
001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
Arabidopsis Description
APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.