Factsheet for VIT_08s0040g03120.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g06520.t01	Wine grape	cytosol	19.43	25.79
VIT_06s0004g03650.t01	Wine grape	nucleus	52.13	22.82
VIT_17s0000g06560.t01	Wine grape	plastid	14.69	22.3
CDY55688	Canola	nucleus	52.13	15.97
CDY10422	Canola	nucleus	52.61	15.83
Bra009565.1-P	Field mustard	nucleus	52.61	15.77
CDX70344	Canola	nucleus	52.61	15.77
CDY04868	Canola	nucleus	51.66	15.73
KRH19783	Soybean	nucleus	55.45	15.5
KRH32378	Soybean	nucleus	54.98	15.4
AT5G02810.1	Thale cress	nucleus	52.61	15.27
Solyc10g086000.1.1	Tomato	nucleus	52.13	15.07
VIT_13s0067g03390.t01	Wine grape	nucleus	54.5	14.95
VIT_15s0048g02540.t01	Wine grape	nucleus	43.13	14.2
VIT_16s0098g00900.t01	Wine grape	nucleus	41.23	12.65
VIT_17s0000g06570.t01	Wine grape	nucleus	30.33	11.62
Bra028861.1-P	Field mustard	nucleus	34.6	11.44
VIT_06s0004g03660.t01	Wine grape	nucleus	3.32	6.8

Protein Annotations

EntrezGene:100267136	wikigene:100267136	MapMan:27.1.4	Gene3D:3.40.50.2300	EMBL:AM476803	EMBL:AM484191
ProteinID:CAN70741	ProteinID:CAN70741.1	ProteinID:CAN83993	ProteinID:CAN83993.1	ProteinID:CBI32628	ProteinID:CBI32628.3
InterPro:CheY-like_superfamily	UniProt:D7TQA8	EMBL:FN596008	GO:GO:0000160	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789
EntrezGene:LOC100267136	wikigene:LOC100267136	PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF34
SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0001983C62	ArrayExpress:VIT_08s0040g03120	EnsemblPlantsGene:VIT_08s0040g03120
EnsemblPlants:VIT_08s0040g03120.t01	RefSeq:XP_002275837	RefSeq:XP_002275837.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr8:-:14072942..14074698

Molecular Weight (calculated)

23418.8 Da

IEP (calculated)

5.360

GRAVY (calculated)

-0.591

Length

211 amino acids

Sequence
(BLAST)

001: MNGDGKIGLP DPGQCGEDGK DIKARDGDEV PSADGEGDDV SDDEESMDCY EALVLMKSRV LLVENDDSTR YVIGALLRNC GYQVTETSNG LQAWRILKDT
101: SNHIDLVLTE VNLPRLSGIA LLCKIMNHKT RKNIPVIMMS THDSGALVLK CLSKGATDFL VKPVRKNELK FLWQHIWRRR QNNGFPCGSK GDTQDLKPKS
201: DGDSNFQPQQ Q

Best Arabidopsis Sequence Match ( AT5G02810.1 )
(BLAST)

001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS

Arabidopsis Description

APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.