Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0040g03120.t01 | Wine grape | nucleus | 22.82 | 52.13 |
| KRH24970 | Soybean | cytosol, endoplasmic reticulum, nucleus | 57.88 | 44.57 |
| KRG88711 | Soybean | nucleus | 57.26 | 36.08 |
| VIT_13s0067g03390.t01 | Wine grape | nucleus | 56.43 | 35.37 |
| VIT_17s0000g06520.t01 | Wine grape | cytosol | 8.92 | 27.04 |
| VIT_17s0000g06560.t01 | Wine grape | plastid | 6.64 | 23.02 |
| VIT_15s0048g02540.t01 | Wine grape | nucleus | 28.63 | 21.53 |
| VIT_16s0098g00900.t01 | Wine grape | nucleus | 28.01 | 19.62 |
| VIT_17s0000g06570.t01 | Wine grape | nucleus | 17.01 | 14.88 |
| VIT_06s0004g03660.t01 | Wine grape | nucleus | 2.7 | 12.62 |
Protein Annotations
| EntrezGene:100246836 | wikigene:100246836 | MapMan:27.1.4 | Gene3D:3.40.50.2300 | ProteinID:CBI16234 | ProteinID:CBI16234.3 |
| InterPro:CheY-like_superfamily | UniProt:D7SKQ6 | EMBL:FN594951 | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR001789 |
| EntrezGene:LOC100246836 | wikigene:LOC100246836 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF34 |
| SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0001BE0F7F | ArrayExpress:VIT_06s0004g03650 | EnsemblPlantsGene:VIT_06s0004g03650 |
| EnsemblPlants:VIT_06s0004g03650.t01 | unigene:Vvi.16575 | RefSeq:XP_002281776 | RefSeq:XP_002281776.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr6:+:4607415..4628270
Molecular Weight (calculated)
52504.7 Da
IEP (calculated)
4.935
GRAVY (calculated)
-0.709
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFVQANNDG GGEGGLVNRE NSTWDEGKEV RNGMVGEGQG LGSSEEDEPG SNEIIEDANK GSEEAIQVHD GLQNSQQQPQ GSAINWDSFL PIRSLKVLLV
101: ENDDSTRHVV TALLRNCSYE VTAVANGLQA WKILEDLTNH IDIVLTEVVM PFISGIGLLC KIMSHKTFKN IPVIMMSSHD SMGIVFKCLS KGAVDFLVKP
201: IRKNELKNLW QHVWRRCHSS SGSGSESGTQ TKKSVKSKSN DESENNTGSS DERDNGSTGP SIRDGSDNGS GTQSSWTKRA AEVDSPQPLS PLDQLADAPD
301: STCPQVIHTK PGTLSNQWVH VIETKECQGK DEQPDNVAMG RDLELGVATN PAVQLEYQHE KFSTYPTCKR QNKLPESDSK PFDKEHLEHN STSANCTDPQ
401: VESRTFENPN GLSDVSQIKD KGSCETTELP PLDLSLKRLR GAGDVGACVH DDRSILRHSD LSAFSKYNTA SSANQQKSGT NL
101: ENDDSTRHVV TALLRNCSYE VTAVANGLQA WKILEDLTNH IDIVLTEVVM PFISGIGLLC KIMSHKTFKN IPVIMMSSHD SMGIVFKCLS KGAVDFLVKP
201: IRKNELKNLW QHVWRRCHSS SGSGSESGTQ TKKSVKSKSN DESENNTGSS DERDNGSTGP SIRDGSDNGS GTQSSWTKRA AEVDSPQPLS PLDQLADAPD
301: STCPQVIHTK PGTLSNQWVH VIETKECQGK DEQPDNVAMG RDLELGVATN PAVQLEYQHE KFSTYPTCKR QNKLPESDSK PFDKEHLEHN STSANCTDPQ
401: VESRTFENPN GLSDVSQIKD KGSCETTELP PLDLSLKRLR GAGDVGACVH DDRSILRHSD LSAFSKYNTA SSANQQKSGT NL
001: MNANEEGEGS RYPITDRKTG ETKFDRVESR TEKHSEEEKT NGITMDVRNG SSGGLQIPLS QQTAATVCWE RFLHVRTIRV LLVENDDCTR YIVTALLRNC
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
101: SYEVVEASNG IQAWKVLEDL NNHIDIVLTE VIMPYLSGIG LLCKILNHKS RRNIPVIMMS SHDSMGLVFK CLSKGAVDFL VKPIRKNELK ILWQHVWRRC
201: QSSSGSGSES GTHQTQKSVK SKSIKKSDQD SGSSDENENG SIGLNASDGS SDGSGAQSSW TKKAVDVDDS PRAVSLWDRV DSTCAQVVHS NPEFPSNQLV
301: APPAEKETQE HDDKFEDVTM GRDLEISIRR NCDLALEPKD EPLSKTTGIM RQDNSFEKSS SKWKMKVGKG PLDLSSESPS SKQMHEDGGS SFKAMSSHLQ
401: DNREPEAPNT HLKTLDTNEA SVKISEELMH VEHSSKRHRG TKDDGTLVRD DRNVLRRSEG SAFSRYNPAS NANKISGGNL GSTSLQDNNS QDLIKKTEAA
501: YDCHSNMNES LPHNHRSHVG SNNFDMSSTT ENNAFTKPGA PKVSSAGSSS VKHSSFQPLP CDHHNNHASY NLVHVAERKK LPPQCGSSNV YNETIEGNNN
601: TVNYSVNGSV SGSGHGSNGP YGSSNGMNAG GMNMGSDNGA GKNGNGDGSG SGSGSGSGNL ADENKISQRE AALTKFRQKR KERCFRKKVR YQSRKKLAEQ
701: RPRVRGQFVR KTAAATDDND IKNIEDS
Arabidopsis Description
APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.