Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020263.1-P | Field mustard | nucleus | 35.92 | 30.08 |
| CDY09224 | Canola | nucleus | 35.92 | 28.91 |
| AT2G46670.1 | Thale cress | nucleus | 39.81 | 22.4 |
| Solyc03g081270.1.1 | Tomato | plastid | 39.81 | 16.14 |
| VIT_13s0067g03390.t01 | Wine grape | nucleus | 55.34 | 7.41 |
| VIT_15s0048g02540.t01 | Wine grape | nucleus | 45.63 | 7.33 |
| VIT_17s0000g06570.t01 | Wine grape | nucleus | 37.86 | 7.08 |
| VIT_16s0098g00900.t01 | Wine grape | nucleus | 45.63 | 6.83 |
| VIT_08s0040g03120.t01 | Wine grape | nucleus | 6.8 | 3.32 |
| VIT_06s0004g03650.t01 | Wine grape | nucleus | 12.62 | 2.7 |
| VIT_17s0000g06520.t01 | Wine grape | cytosol | 1.94 | 1.26 |
| VIT_17s0000g06560.t01 | Wine grape | plastid | 0.97 | 0.72 |
Protein Annotations
| MapMan:35.1 | ProteinID:CBI16233 | ProteinID:CBI16233.3 | InterPro:CCT_domain | UniProt:D7SKQ5 | EMBL:FN594951 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:IPR010402 | PFAM:PF06203 | PFscan:PS51017 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF34 |
| TIGR:TC51808 | UniParc:UPI0001BE0F7E | ArrayExpress:VIT_06s0004g03660 | EnsemblPlantsGene:VIT_06s0004g03660 | EnsemblPlants:VIT_06s0004g03660.t01 | SEG:seg |
Description
No Description!
Coordinates
chr6:+:4628435..4630155
Molecular Weight (calculated)
11288.1 Da
IEP (calculated)
10.789
GRAVY (calculated)
-1.269
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDIGAAGN SGAGAISGKG GGNRVEEDRF AQREAALTKF RQKRKERCFE KKVRYQSRKK LAEQRPRIRG QFVRQNVSDN KAGKDGQSDD PSSANNSCDG
101: GIR
101: GIR
001: MLLTTFPCEI CVAVMSSHDS MGLVFKCLSK GAVDFLVKPI RKNELKILWQ HVWRRCQSSS GSGSESGTHQ TQKSVKSKSI KKSDQDSGSS DENENGSIGL
101: NASDGSSDGS GAQSSWTKKA VDVDDSPRAV SLWDRVDSTC AQVVHSNPEF PSNQLVAPPA EKETQEHDDK FEDVTMGRDL EISIRRNCDL ALEPKDEPLS
201: KTTGIMRQDN SFEKSSSKWK MKVGKGPLDL SSESPSSKQM HEDGGSSFKA MSSHLQDNRE PEAPNTHLKT LDTNEASVKI SEELMHVEHS SKRHRGTKDD
301: GTLVRDDRNV LRRSEGSAFS RYNPASNANK ISGGNLGSTS LQDNNSQDLI KKTEAAYDCH SNMNESLPHN HRSHVGSNNF DMSSTTENNA FTKPGAPKVS
401: SAGSSSVKHS SFQPLPCDHH NNHASYNLVH VAERKKLPPQ CGSSNVYNET IEGNNNTVNY SVNGSVSGSG HGSNGPYGSS NGMNAGGMNM GSDNGAGKNG
501: NGDGSGSGSG SGSGNLADEN KISQREAALT KFRQKRKERC FRKKVRYQSR KKLAEQRPRV RGQFVRKTAA ATDDNDIKNI EDS
101: NASDGSSDGS GAQSSWTKKA VDVDDSPRAV SLWDRVDSTC AQVVHSNPEF PSNQLVAPPA EKETQEHDDK FEDVTMGRDL EISIRRNCDL ALEPKDEPLS
201: KTTGIMRQDN SFEKSSSKWK MKVGKGPLDL SSESPSSKQM HEDGGSSFKA MSSHLQDNRE PEAPNTHLKT LDTNEASVKI SEELMHVEHS SKRHRGTKDD
301: GTLVRDDRNV LRRSEGSAFS RYNPASNANK ISGGNLGSTS LQDNNSQDLI KKTEAAYDCH SNMNESLPHN HRSHVGSNNF DMSSTTENNA FTKPGAPKVS
401: SAGSSSVKHS SFQPLPCDHH NNHASYNLVH VAERKKLPPQ CGSSNVYNET IEGNNNTVNY SVNGSVSGSG HGSNGPYGSS NGMNAGGMNM GSDNGAGKNG
501: NGDGSGSGSG SGSGNLADEN KISQREAALT KFRQKRKERC FRKKVRYQSR KKLAEQRPRV RGQFVRKTAA ATDDNDIKNI EDS
Arabidopsis Description
APRR7Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.