Factsheet for TraesCS5A01G295000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G302400.1	Wheat	cytosol	95.04	92.93
HORVU5Hr1G077800.1	Barley	cytosol	82.85	82.85
HORVU5Hr1G077760.1	Barley	cytosol	83.68	82.15
TraesCS4A01G213200.1	Wheat	cytosol, mitochondrion, nucleus	57.85	59.45
TraesCS6A01G181100.1	Wheat	cytosol	43.39	45.85
TraesCS6A01G184100.2	Wheat	nucleus	46.9	43.74
TraesCS7A01G365600.3	Wheat	nucleus	46.49	43.02
TraesCS2A01G293200.1	Wheat	cytosol	38.02	42.79
TraesCS7A01G362600.1	Wheat	plastid	17.56	23.94
TraesCS1A01G317100.1	Wheat	mitochondrion	17.98	21.91
TraesCS1A01G275300.1	Wheat	cytosol, nucleus, plastid	17.15	21.23
TraesCS5A01G119300.2	Wheat	mitochondrion	14.46	15.77
TraesCS5A01G065300.1	Wheat	nucleus	18.18	14.33
TraesCS2A01G177100.1	Wheat	cytosol	20.45	14.29

Protein Annotations

MapMan:12.3.2.1.1	Gene3D:3.40.800.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0004407	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016575	GO:GO:0016787
GO:GO:0019538	InterPro:His_deacetylse	InterPro:His_deacetylse_1	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf	InterPro:IPR037138
PFAM:PF00850	PIRSF:PIRSF037913	PRINTS:PR01270	PRINTS:PR01271	PANTHER:PTHR10625	PANTHER:PTHR10625:SF126
SUPFAM:SSF52768	EnsemblPlantsGene:TraesCS5A01G295000	EnsemblPlants:TraesCS5A01G295000.1	InterPro:Ureohydrolase_dom_sf	TIGR:cd09991	SEG:seg

Description

No Description!

Coordinates

chr5A:+:503667634..503669088

Molecular Weight (calculated)

54554.4 Da

IEP (calculated)

6.313

GRAVY (calculated)

-0.559

Length

484 amino acids

Sequence
(BLAST)

001: MDTEGHSLPS ASCGDGRKRR VCYYYDPGVA NVDYGANHNM VPRRVAMAHA LVEKYGLLAD MERLRVRPAT EAELRAFHDD AYVRLLRDIT PDAYHDGDLR
101: DRARACGVGV PDTDETDASA YDNPAIDGLW DYCLRYAGGS LAAARALADG SSDIAINWSG GMHHACRGKA SGFCYVNDIV LAIQELLKHF ERVLYVDIDV
201: HHGDGVEEHF KRESRVMTVS FHLYDIDRDV KPFFPGTGKV EDVGEGEGKY YTLNVPMKAG MDDERYQQLF RPIMDEVMEK FVPDAVVLQC GADSLYGDRL
301: GEFRLSVKGH AGCVSYLRSF NVPLLLLGGG GYTVNHVASC WCYETAVAVG KEKEISDEIP FHGYEHYYRD QGYKLHFTVP KKNGNKKDDL IDKIKQDALM
401: NLAMLKPPPT TVGEHRPSKR HAINVKAHYD QNQDKEAKKY RCRREDDDPM ERLHRLCGEA DRYDFFTELG KRKMSGLVNT TPSD

Best Arabidopsis Sequence Match ( AT3G44680.1 )
(BLAST)

001: MRSKDKISYF YDGDVGSVYF GPNHPMKPHR LCMTHHLILA YGLHSKMEVY RPHKAYPIEM AQFHSPDYVE FLQRINPENQ NLFPNEMARY NLGEDCPVFE
101: DLFEFCQLYA GGTIDAARRL NNKLCDIAIN WAGGLHHAKK CDASGFCYIN DLVLGILELL KHHPRVLYID IDVHHGDGVE EAFYFTDRVM TVSFHKFGDK
201: FFPGTGDVKE IGEREGKFYA INVPLKDGID DSSFNRLFRT IISKVVEIYQ PGAIVLQCGA DSLARDRLGC FNLSIDGHAE CVKFVKKFNL PLLVTGGGGY
301: TKENVARCWT VETGILLDTE LPNEIPENDY IKYFAPDFSL KIPGGHIENL NTKSYISSIK VQILENLRYI QHAPSVQMQE VPPDFYIPDF DEDEQNPDVR
401: ADQRSRDKQI QRDDEYFDGD NDNDAS

Arabidopsis Description

HDA9Histone deacetylase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.