Factsheet for TraesCS7A01G362600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G266000.1	Wheat	plastid	97.46	98.02
TraesCS7D01G360500.1	Wheat	plastid	96.9	97.45
Os06t0571100-01	Rice	plastid	84.79	85.51
HORVU0Hr1G021730.1	Barley	cytosol	27.32	80.83
EER89968	Sorghum	plastid	78.31	79.43
Zm00001d046348_P003	Maize	plastid	77.46	72.18
KRH05486	Soybean	cytosol	70.7	72.13
VIT_04s0008g00910.t01	Wine grape	plastid	71.83	71.03
Solyc08g065350.2.1	Tomato	cytosol	69.3	70.89
PGSC0003DMT400076991	Potato	cytosol	69.58	69.77
Bra009877.1-P	Field mustard	cytosol	66.2	67.34
AT5G26040.2	Thale cress	endoplasmic reticulum	68.73	63.05
GSMUA_Achr10P...	Banana	plastid	74.37	60.14
CDX88212	Canola	cytosol, golgi, nucleus, plastid	67.04	59.95
CDX80555	Canola	cytosol, golgi, nucleus, plastid	61.97	58.82
TraesCS6A01G181100.1	Wheat	cytosol	25.92	20.09
TraesCS4A01G213200.1	Wheat	cytosol, mitochondrion, nucleus	25.92	19.53
TraesCS2A01G293200.1	Wheat	cytosol	22.54	18.6
TraesCS6A01G184100.2	Wheat	nucleus	25.92	17.73
TraesCS7A01G365600.3	Wheat	nucleus	25.92	17.59
TraesCS5A01G295000.1	Wheat	cytosol	23.94	17.56
TraesCS1A01G317100.1	Wheat	mitochondrion	18.59	16.62
TraesCS1A01G275300.1	Wheat	cytosol, nucleus, plastid	15.49	14.07
TraesCS5A01G119300.2	Wheat	mitochondrion	16.9	13.51
TraesCS2A01G177100.1	Wheat	cytosol	21.13	10.82
TraesCS5A01G065300.1	Wheat	nucleus	18.03	10.42

Protein Annotations

EnsemblPlants:TraesCS7A01G362600.1	EnsemblPlantsGene:TraesCS7A01G362600	Gene3D:3.40.800.20	InterPro:His_deacetylse	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf
InterPro:IPR037138	InterPro:Ureohydrolase_dom_sf	PANTHER:PTHR43497	PANTHER:PTHR43497:SF2	PFAM:PF00850	PRINTS:PR01270
SEG:seg	SUPFAM:SSF52768	TIGR:cd09993	MapMan:12.3.2.1.3	:	:

Description

No Description!

Coordinates

chr7A:-:536980659..536984248

Molecular Weight (calculated)

39184.0 Da

IEP (calculated)

6.604

GRAVY (calculated)

-0.098

Length

355 amino acids

Sequence
(BLAST)

001: MSSSSAAAGA SVPGATPADA LRRNRIISSK LYFDVPGSKA PVVYSTAYDI AFLGIEKMHP FDSSKWGRIC RFLTKEGHLE KNRVVEPLEA SREDLLVVHT
101: EAYLNSLKSS FRVAAIVEVP PLTLIPNWLV QQRLLYPFRK QVGGSILSAK LALERGWAIN VGGGFHHCSA EEGGGFCAYA DITLCIQFAF VRLDISRVMI
201: IDLDAHQGNG HEKDFAHDGR VYILDMYNAG IYPFDHAAKR YIDQKVELVS GTETDDYLDQ LDKALKVAQT RFQPQLIIYN AGTDILDGDP LGNLKISPEG
301: VVIRDEKVFR FAKDQNIPLV MMTSGGYMKS SARVIADSIT NLSQKDLIQL GSQPD

Best Arabidopsis Sequence Match ( AT5G26040.2 )
(BLAST)

001: MTHTRVISTW TELTRDLAIY LLFTFFAIKV FKFLFSCNRT SEISSFSMAT HPEALRRERI LNSKLYFDVP LSKVSIIYSS SYDISFMGIE KLHPFDSSKW
101: GRVCKFLVSD GFLEEKAIVE PLEASKIDLL VVHSENYLNS LKSSATVARI TEVAPVAFFP NFLVQQKVLY PFRKQVGGTI LAAKLATERG WAINIGGGFH
201: HCTAERGGGF CAFADISLCI HFAFLRLRIS RVMIIDLDAH QGNGHETDLG DDNRVYILDM YNPEIYPFDY RARRFIDQKV EVMSGTTTDE YLRKLDEALE
301: VASRNFQPEL VIYNAGTDIL DGDPLGLLKI SPDGITSRDE KVFRFAREKN IPLVMLTSGG YMKSSARVIA DSIENLSRQG LIQTRPE

Arabidopsis Description

HDA2Histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q944K3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.