Factsheet for TraesCS7D01G360500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G266000.1	Wheat	plastid	97.17	97.17
TraesCS7A01G362600.1	Wheat	plastid	97.45	96.9
Os06t0571100-01	Rice	plastid	84.99	85.23
HORVU0Hr1G021730.1	Barley	cytosol	27.2	80.0
EER89968	Sorghum	plastid	79.04	79.71
Zm00001d046348_P003	Maize	plastid	78.19	72.44
KRH05486	Soybean	cytosol	70.54	71.55
Solyc08g065350.2.1	Tomato	cytosol	69.69	70.89
VIT_04s0008g00910.t01	Wine grape	plastid	71.95	70.75
PGSC0003DMT400076991	Potato	cytosol	69.97	69.77
Bra009877.1-P	Field mustard	cytosol	66.01	66.76
AT5G26040.2	Thale cress	endoplasmic reticulum	68.84	62.79
GSMUA_Achr10P...	Banana	plastid	75.07	60.36
CDX88212	Canola	cytosol, golgi, nucleus, plastid	66.86	59.45
CDX80555	Canola	cytosol, golgi, nucleus, plastid	61.76	58.29
TraesCS6D01G168400.1	Wheat	cytosol	26.06	20.09
TraesCS4D01G100000.1	Wheat	cytosol	25.5	19.11
TraesCS2D01G291000.1	Wheat	cytosol	22.38	18.37
TraesCS7D01G356800.1	Wheat	nucleus	26.06	17.73
TraesCS5D01G302400.1	Wheat	cytosol	24.08	17.17
TraesCS1D01G317100.1	Wheat	mitochondrion	18.13	16.24
TraesCS6D01G171000.1	Wheat	golgi	26.06	16.03
TraesCS3D01G422300.1	Wheat	cytosol	14.45	15.6
TraesCS1D01G274900.1	Wheat	cytosol, nucleus, plastid	14.73	14.21
TraesCS5D01G126600.1	Wheat	mitochondrion, plastid, vacuole	17.0	13.51
TraesCS2D01G185200.1	Wheat	cytosol, golgi	21.53	10.97
TraesCS5D01G076100.1	Wheat	nucleus	18.13	10.46

Protein Annotations

EnsemblPlants:TraesCS7D01G360500.1	EnsemblPlantsGene:TraesCS7D01G360500	Gene3D:3.40.800.20	InterPro:His_deacetylse	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf
InterPro:IPR037138	InterPro:Ureohydrolase_dom_sf	PANTHER:PTHR43497	PANTHER:PTHR43497:SF2	PFAM:PF00850	PRINTS:PR01270
SEG:seg	SUPFAM:SSF52768	TIGR:cd09993	MapMan:12.3.2.1.3	:	:

Description

No Description!

Coordinates

chr7D:+:463261603..463265116

Molecular Weight (calculated)

38992.8 Da

IEP (calculated)

6.723

GRAVY (calculated)

-0.113

Length

353 amino acids

Sequence
(BLAST)

001: MSSSSAAASV PGATPADALR RNRIISSKLY FDVPGSKAPV VYSTAYDIAF LGIEKMHPFD SSKWGRICRF LTKEGHLEKT RVVEPLEASK EDLLVVHTEA
101: YLNSLRSSFR VAAIVEVPPL TLMPNWLVQQ RLLYPFRKQV GGSILSAKLA LERGWAINVG GGFHHCSAEE GGGFCAYADI SLSIQFAFVR LDISRVMIID
201: LDAHQGNGHE KDFANDGRVY ILDMYNAGIY PFDHAAKRYI DQKVELVSGT ETDDYLDQLD KALKVAQTRF QPQLIIYNAG TDILDGDPLG NLKISPEGVV
301: IRDEKVFRFA KDQNIPLVMM TSGGYMKSSA RVIADSITNL SQKNLVQLGS QPD

Best Arabidopsis Sequence Match ( AT5G26040.2 )
(BLAST)

001: MTHTRVISTW TELTRDLAIY LLFTFFAIKV FKFLFSCNRT SEISSFSMAT HPEALRRERI LNSKLYFDVP LSKVSIIYSS SYDISFMGIE KLHPFDSSKW
101: GRVCKFLVSD GFLEEKAIVE PLEASKIDLL VVHSENYLNS LKSSATVARI TEVAPVAFFP NFLVQQKVLY PFRKQVGGTI LAAKLATERG WAINIGGGFH
201: HCTAERGGGF CAFADISLCI HFAFLRLRIS RVMIIDLDAH QGNGHETDLG DDNRVYILDM YNPEIYPFDY RARRFIDQKV EVMSGTTTDE YLRKLDEALE
301: VASRNFQPEL VIYNAGTDIL DGDPLGLLKI SPDGITSRDE KVFRFAREKN IPLVMLTSGG YMKSSARVIA DSIENLSRQG LIQTRPE

Arabidopsis Description

HDA2Histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q944K3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.