Factsheet for TraesCS5D01G076100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G065300.1	Wheat	nucleus	97.88	97.56
TraesCS5B01G072100.1	Wheat	nucleus	97.39	97.07
HORVU5Hr1G017550.9	Barley	nucleus	94.93	94.63
Os07t0164100-01	Rice	nucleus	76.8	75.44
Zm00001d018864_P002	Maize	nucleus	73.53	72.7
OQU88485	Sorghum	nucleus	73.53	71.54
KRH56687	Soybean	nucleus	47.06	69.06
CDX82341	Canola	nucleus	42.81	59.01
KRH03799	Soybean	nucleus	50.0	56.35
Bra001708.1-P	Field mustard	nucleus	38.24	56.12
CDY24487	Canola	cytosol, nucleus, peroxisome	49.51	55.7
GSMUA_Achr8P20260_001	Banana	nucleus	56.54	54.66
AT3G18520.2	Thale cress	cytosol	49.35	53.55
CDX92243	Canola	nucleus	49.18	52.81
PGSC0003DMT400014582	Potato	nucleus	52.29	52.46
Bra022329.1-P	Field mustard	nucleus	48.86	52.46
Solyc03g119730.2.1	Tomato	nucleus	51.63	51.8
VIT_17s0000g04120.t01	Wine grape	nucleus	53.1	46.63
CDY52901	Canola	nucleus	30.23	39.7
TraesCS1D01G317100.1	Wheat	mitochondrion	23.37	36.29
TraesCS3D01G422300.1	Wheat	cytosol	16.01	29.97
TraesCS1D01G274900.1	Wheat	cytosol, nucleus, plastid	15.36	25.68
TraesCS5D01G126600.1	Wheat	mitochondrion, plastid, vacuole	18.46	25.45
TraesCS2D01G185200.1	Wheat	cytosol, golgi	24.51	21.64
TraesCS2D01G291000.1	Wheat	cytosol	14.54	20.7
TraesCS6D01G168400.1	Wheat	cytosol	14.38	19.21
TraesCS7D01G360500.1	Wheat	plastid	10.46	18.13
TraesCS5D01G302400.1	Wheat	cytosol	14.54	17.98
TraesCS7D01G356800.1	Wheat	nucleus	15.2	17.92
TraesCS4D01G100000.1	Wheat	cytosol	13.56	17.62
TraesCS6D01G171000.1	Wheat	golgi	15.36	16.38
Os07t0164300-01	Rice	plasma membrane	0.16	0.33

Protein Annotations

EnsemblPlants:TraesCS5D01G076100.1	EnsemblPlantsGene:TraesCS5D01G076100	Gene3D:3.40.800.20	GO:GO:0008150	GO:GO:0009294	GO:GO:0009987
InterPro:His_deacetylse	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf	InterPro:IPR001876	InterPro:IPR037138	InterPro:Ureohydrolase_dom_sf
InterPro:Znf_RanBP2	PANTHER:PTHR10625	PANTHER:PTHR10625:SF180	PFAM:PF00850	PRINTS:PR01270	ScanProsite:PS01358
SEG:seg	SUPFAM:SSF52768	TIGR:cd09992	MapMan:12.3.2.1.2	:	:

Description

No Description!

Coordinates

chr5D:+:75357354..75367915

Molecular Weight (calculated)

65988.0 Da

IEP (calculated)

6.057

GRAVY (calculated)

-0.260

Length

612 amino acids

Sequence
(BLAST)

001: MTSNMRPLNS KKGEVPSHGR ENCGVSDQAF HGNCQSCDGV GKPSYPRANG VSLKESGTCS FSCDHANALL VDVPKGSPAR PGHIDSADCG QHAKNESCMP
101: CNDLQQESDR EQAGDTLDDL FFFNDEEDDD IDWEPSARLA ENRWFCLNCT MPNLDEVKHC LNCHELKGSE VAAGYDVFKT HIARAALVSA DTAPVLVSTA
201: IGFDERMLLH SEMEMKPNPH PERPNRLRAI AASLAAAGIF PSKCALVPPR EITKEELVMV HTSDHVESVE QTKNMLYSYF TSDTYANGHS ACAAKLAAGL
301: CADLASLIVS GRVRNGFALV RPPGHHAGVK QAMGFCLHNN AAVAALAAQK AGAKKVLIVD WDVHHGNGTQ EIFEGNKSVL YISLHRHEDG SFYPGTGAAD
401: EVGDLDGKGF SVNIPWSCGG VGDNDYIFAF QHVVLPIATE FAPDITIISA GFDAARGDPL GCCDVTPAGY SQMTSMLTAC SEGKLLVILE GGYNLRSISS
501: SATEVVKVLL GDGPSYGTDA AAPSKEGMQT VLQVLDIQQK YWPVLVPIFA SLQVQAQQGP TSSNYVNAEN MLKRRMLTGG PGPVWWKWGS KRLLYEVLFE
601: GRRPRKSKAK GK

Best Arabidopsis Sequence Match ( AT3G18520.1 )
(BLAST)

001: MVVETIERSC EGSKRRHVNG GDIAVPCSGE ECSNGDINVA PGVSAKRARV SREMTFEDIY GADALLNDDD DEDDDCDWEP VQAPMEFVKW CCVNCTMSNP
101: GDMVHCCICG EHKESGILRH GYLASPFFKD TGLIEVEEKY GGSSSATSST AVGFDERMLL HSEFEVKAQP HPERPDRLRA IAASLATAGV FPGRCLPINA
201: REITKQELQM VHTSEHVDAV DTTSQLLYSY FTSDTYANEY SARAARLAAG LCADLATDIF TGRVKNGFAL VRPPGHHAGV RHAMGFCLHN NAAVAALVAQ
301: AAGAKKVLIV DWDVHHGNGT QEIFEQNKSV LYISLHRHEG GNFYPGTGAA DEVGSNGGEG YCVNVPWSCG GVGDKDYIFA FQHVVLPIAS AFSPDFVIIS
401: AGFDAARGDP LGCCDVTPAG YSRMTQMLGD LCGGKMLVIL EGGYNLRSIS ASATAVIKVL LGENPENELP IATTPSVAGL QTVLDVLNIQ LEFWPSLAIS
501: YSKLLSELEA RLIENKKNQM KRKVVRVPTW WKWGRKKLLY NFLSARMISR SK

Arabidopsis Description

HDA15Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:F4J8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.